Gene Information

Name : PARA_19980 (PARA_19980)
Accession : YP_004823684.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 2081427 - 2083508 bp
Length : 2082 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACGCAACTTCTCGATGCTGTTCCTCTAACCACTTTATCTGGTGTAGGCGCGGCAATCTCCGATAAATTAAGCCG
TCTTGGAATTCATAATCTCCAAGACTTACTTTTTCATTTACCTATCCGTTATGAAGATCGCACGAGAATAACACCCATTG
CTGATCTTCGTCCTGAACAATATGCCACCATTGAAGGTGTTGTTCAAACCTGTGAAGTTGCCTTTGGGCGCCGTCCTATT
TTAACTGTAAGTCTCTCTGATGGAACAAGCAAAATTATGCTTCGTTTCTTCAATTTTAATGTAGGGATGAAAAATAGTTT
TCAGATTGGTACGCGCGTCAAAGCGTTTGGTGAAATTAAACGCGGGCGTTTTATGGCGGAAATTCATCATCCTGAGTATC
AAATTATACGGGATAATGCTCCATTGGTTTTAGAGGAAACGCTCACACCAATTTATTCCACAACAGAAGGTTTAAAACAA
AATTCATTACGTAAGCTAACCGATCAAGCATTGGCTTTACTCGATAAAATCCAATTAACGGAAATTTTACCTAATGAATT
TAATCCACATCCTTTTAGCCTAAAGGATGCTATTCGATTTTTGCATCGTCCACCGCCAGATATCTCATTAGATATTTTGG
AGAAAGGACAACATCCCGCACAGCAACGACTTATCTTTGAAGAGCTTCTTGCACATAATCTTGCGATGCAAAAAGTGCGG
TTGGGTACGCAGCAGTTTTTAGCGTTGCCATTGCATTATCAAACTAATTTGAAGCAACGTTTTCTTGCATCTTTGCCTTT
TCAACCAACCAATGCCCAAAATAGAGTGGTGGCCGATATTGAACAGGATTTAGCAAAAGATTATCCGATGATGCGACTTG
TTCAAGGGGATGTAGGCTCAGGGAAAACGTTAGTGGCAGCCTTAGCTGCCTTATTAGCGATTGATAATGGCAAACAAGTG
GCTTTAATGGCGCCAACAGAGATTTTAGCGGAACAGCATGCAAATAATTTCCGCCGTTGGTTAGAACCTTTTGGTATTGA
AGTAGGCTGGTTAGCGGGTAAGGTGAAAGGGAAAGCTCGCCAAACCGAATTGGAAAAGATTAAATCAGGTGCTGTGCAAA
TGGTGGTGGGTACACATGCTTTATTCCAAGAAGAAGTGGAATTTGCTGATTTAGCCTTGGTAATTATTGATGAACAGCAT
CGTTTTGGTGTGCATCAACGTCTAATGTTGCGAGAAAAAGGCGAAAAAGCAGGATTTTATCCACATCAACTGATTATGAC
AGCAACACCAATCCCGAGAACGTTAGCGATGACGGTTTATGCTGATCTTGATACGTCGATTATTGACGAATTGCCACCAG
GTCGAACGCCGATTACGACAGTGGTTATTTCTGAAGAGCGTCGAGATGAAATCGTTGCTCGAGTCAAGAATGCCTGTATT
AATGAAAAACGTCAGGCTTATTGGGTTTGTACTTTAATTGATGAGTCTGAAGTATTAGAAGCGCAAGCAGCCGAGGCCAT
TTGGGAAGATTTAACGAAAGCGTTGCCGATGCTTAAAATTGGTCTTGTACATGGGCGAATGAAACCGCAAGAAAAACAAG
ATATTATGGCTGCCTTTAAAAGTGCAGAACTCGATTTGCTTGTGGCCACAACCGTAATCGAAGTGGGCGTAGATGTGCCG
AATGCCAGTCTTATGATCATTGAAAATGCTGAGCGCTTAGGTTTATCACAACTCCATCAGTTACGTGGGCGAGTAGGACG
TGGCAGCACGGCTTCTTTTTGTGTCCTAATGTATAAACCGCCATTGGGTAAAGTGTCGCAAAAACGTTTACAGGTACTAC
GCGATAGCCAAGATGGCTTTGTGATTTCGGAAAAAGATTTAGAAATTCGCGGCCCGGGTGAGGTATTGGGCACTAAGCAG
ACAGGGATCGCCGAATTTAAGGTGGCGAATTTAATGCGCGATCGTAAAATGATTCCAACCGTTCAACATTATGCTAAAGC
ATTAATAGTGAAATACCCGGATGTGGCAGAAAGTTTAATCCGCCGTTGGCTAAATAATCGAGAAATTTATTCGAATGCCT
AA

Protein sequence :
MSTQLLDAVPLTTLSGVGAAISDKLSRLGIHNLQDLLFHLPIRYEDRTRITPIADLRPEQYATIEGVVQTCEVAFGRRPI
LTVSLSDGTSKIMLRFFNFNVGMKNSFQIGTRVKAFGEIKRGRFMAEIHHPEYQIIRDNAPLVLEETLTPIYSTTEGLKQ
NSLRKLTDQALALLDKIQLTEILPNEFNPHPFSLKDAIRFLHRPPPDISLDILEKGQHPAQQRLIFEELLAHNLAMQKVR
LGTQQFLALPLHYQTNLKQRFLASLPFQPTNAQNRVVADIEQDLAKDYPMMRLVQGDVGSGKTLVAALAALLAIDNGKQV
ALMAPTEILAEQHANNFRRWLEPFGIEVGWLAGKVKGKARQTELEKIKSGAVQMVVGTHALFQEEVEFADLALVIIDEQH
RFGVHQRLMLREKGEKAGFYPHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTVVISEERRDEIVARVKNACI
NEKRQAYWVCTLIDESEVLEAQAAEAIWEDLTKALPMLKIGLVHGRMKPQEKQDIMAAFKSAELDLLVATTVIEVGVDVP
NASLMIIENAERLGLSQLHQLRGRVGRGSTASFCVLMYKPPLGKVSQKRLQVLRDSQDGFVISEKDLEIRGPGEVLGTKQ
TGIAEFKVANLMRDRKMIPTVQHYAKALIVKYPDVAESLIRRWLNNREIYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 6e-104 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PARA_19980 YP_004823684.1 ATP-dependent DNA helicase BAC0356 Protein 0.0 59