|
Name : PARA_15870 (PARA_15870) Accession : YP_004823273.1 Strain : Haemophilus parainfluenzae T3T1 Genome accession: NC_015964 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1604918 - 1608091 bp Length : 3174 bp Strand : - Note : - DNA sequence : ATGCTCAACGAAAACGACATCGAACAACTCACCCTTAAACACCTGCAATCCCTCGGCTGGGAATATCGCTATGGTAAAGA CTTGCCTGTTCATGAAGGCGAATTTGCCCGTGGCGATTTGAGCGGTGTGGTCTTTGTTGAGCAACTGCGTGAAGCGGTGC GTAAGTTTAATCCGCAGCTGCCTGAAAGTGCGGTTGATTCTGTGGTCAAATCGGCAACGAAAAGCGATATTGGCAACTTG GTGGTGCGTAATCAGGCGTTTTATAAACTGTTGCGTGATGGCGTGCGGGTGGAATATACGCTAAACGGTGAGCAAAAAAT CGAGATGGCGAGCTTGGTGGATTTTGAGCATGTGGGGAACAACTGTTTTGTTGCCGTCAATCAGTTGGAAATCCGCAGCC GTAAAGGGGGCAAACGGATTCCTGATATTATCGGCTTTGTCAATGGCCTGCCCTTGGTGGTATTTGAACTCAAAAATCCG CTGCGTGAATCGGCGGATTTGTTGCAGGCGTTTAATCAGTTTGAAACCTATAAAGATGAAATAGCCGAGCTGTTTGTTTA CAACAAAGCCTTGATTATTTCAGACGGCATTGCCGCACGTTTGGGCTCGCTTTCGGCAGATTTCCAACGCTTTACGCCAT GGAAAGTGGTCGATGAAAAAAATAAAAGCGCGCGCTTATATTTTGATGATGAATTGCAAAGCCTGCTCAATGGCTTGCTG AAACCTGAAGATTTATTGGACTATATCCGCTATTTTGTCTTATTTGAACGGAATTCCAGCGGAAAAACCATTAAAAAAAT CGCGGCGTACCATCAATATTACGGCGTAAATGAAGCGGTCGATTCCACACTTTTTGCGACTTCGGAAAAAGGCGACCGCC GCATTGGCGTGATGTGGCATACGCAGGGTTCGGGTAAGTCGATTTCCATGTTGTTTTATGCCGGCAAACTGCTTACGCAG CCTGAATTGAAAAATCCGACGATTGTGGTGGTGACAGACCGCAATGATTTAGACGGTCAGCTTTTCCAAACCTTTTCTTC AGGCAAAGATTTAATCAAACAAACGCCGCAACAAGTGGAAGACCGCGATCAACTGCGCCAACTGCTCGCGCAAAATGAAG TCGGCGGCGTGTTTTTTACGACGATTCAAAAATTCGCCCTAAATGAGGAAGAAAGTCGCTTCCCTGTTTTAAATGAGCGC AGCAATATTATTGTAATCAGCGATGAGGCACACCGCAGCCAATATGGCTTTACGCAAAAATTGCATAAAGGCAAATTCCA GGCAGGCTACGCCCGCCATTTGCGCGATGCGCTGCCTAATGCTTCGTTTATCGGTTTTACCGGCACGCCGATTAGCCTAG AAGATAAGGATACGCAAGATGTGTTCGGGCGCTATGTGTCGATTTATGACTTGCAAGATGCGGTGGAAGATGGCGCAACC GTGCCGATTGTGTATGAAGCGCGCCAAATCCGCTTAAACGAAAAAGAACATGATGAGCTATTCAAAGAAATTGATGATTT GCTGGAAGAGGAGCAATCCCCTGCCCTGCGTTTGCAGGAAAAATTGCTGGGTTCGCAAGCCCGTCTGGCTGATTTAGCCG CGGATTTTGTGCAGCATTTTGCCAAACGCAATGAAGTCGTCGACAGCAAAGCGATGATGGTGGTTTCCAGCCGTCAGATT TGCGTGGATTTATACAATGAAATCATCAAACTGCACCCTGAATGGCATTCGGACAATATTAACGAAGGGGCGATTAAAAT TGTGATGACGGGTTCGGCTTCCGATGCGCCGGAAATGCAGAAACACGTTTACAGTAAACAGGAAAAACAAACGCTGGAAC GCCGCTTTAAAGACCCGAACGATCCGCTGAAAGTAGTGATTGTGCGCGATATGTGGCTGACGGGCTTTGATGCGCCTTGT TGTAATACGATGTATATCGACAAGCCGATGCAGGGGCATAACCTGATGCAGGCAATTGCTCGGGTTAACCGTGTATTCCG CAATAAAAGCCGAGAAAATGGCGGCTTGATTGTGGATTATGTTGGTATTGCTGAAAAACTCAAAGAAGCGACCCAGCAAT ACACCAATTCGCAAGGCAAGGGCAAGCTGACTGATAACGTGATTGATGTGTTCTTTAAAATGAAAGAGCATCTAGAGTTT GTCCGCAGCCTGTTTGCAACGCCGGTTGAAGGAAAAACTTTTGATGTTCAGACGGCCTTAGAAAAAGATGATCCAAAGGA TCTTTTGGTGGAGATTCGTTTTGCCGCCAACCATATTTTGGGCCTCGATCGATTACCGTTTGAGGGCAAAGCGCACGAGC AACATTGGTTTAATAAAAAAGAAACCGAGCCACGTAAAAAAGCCTTTTTGAAAGCGGCAGGATTAGTGAAAAAAGGCTAT ATGCTATGCGGCGCATTGGCTGAAGTTGAGCCATACAACCAAGAAATTGCTTTTTATGATGCAGTACGCGCTATTCTCAC GAAGCGTGATCAAAACGGTACGGGTTCTAATGAAAGACAGATTTTGTTGAAAAAACTGGTCAATCAAGCCGTCTATTCCG AAGGCGTGATTGATTTATTTGACCTGTTGGAAAAACCGCAACCGCAAATCAATTTACTTTCTGAAGAGTTTTTGCAGACT ATTAAAAACAGCCCGACTAAGAATTTATGGGTTAGCGCGGTAGAGCGTTATTTAGCAAGCGAAATCAAAGCCAAATCAGG CGCAAACCTCACCTTGCAAAAAGACTTCGAGCAGCGCTTAAAAGAAGCCTTAAATCAATATCACAACCACAATTTAAGCG TGGTAGAAATTTTGGATGAGCTCTTCAAAATGAGCCAAGACTTCCAAGAACGCTTAGCTTTAGGTGAAAAGCTGGGGCTA AAAAAAGAAGAGCTCGCCTTCTACGAAGCCCTCGCCCAAAACCAAAGCGCCCGTGAACTGATGGGCGATGAAGTATTGAG TAAACTTGCCAAAGAAATTACCGATACTTTAAGACGCTCAGTTACCATCGACTGGCAATACAAAGAAGGCGTACGCGCCA AAATGCGTATTCTCGTGAAACGAGCTTTACAGCGTTATAAATACCCACCGGATAAACAAGAAGAAGCCGTGAGCTATGTG ATTAAGCAAGCAGAGGAAATTGCAGAAGATTTAACCGCTGAGAAATCACTATAG Protein sequence : MLNENDIEQLTLKHLQSLGWEYRYGKDLPVHEGEFARGDLSGVVFVEQLREAVRKFNPQLPESAVDSVVKSATKSDIGNL VVRNQAFYKLLRDGVRVEYTLNGEQKIEMASLVDFEHVGNNCFVAVNQLEIRSRKGGKRIPDIIGFVNGLPLVVFELKNP LRESADLLQAFNQFETYKDEIAELFVYNKALIISDGIAARLGSLSADFQRFTPWKVVDEKNKSARLYFDDELQSLLNGLL KPEDLLDYIRYFVLFERNSSGKTIKKIAAYHQYYGVNEAVDSTLFATSEKGDRRIGVMWHTQGSGKSISMLFYAGKLLTQ PELKNPTIVVVTDRNDLDGQLFQTFSSGKDLIKQTPQQVEDRDQLRQLLAQNEVGGVFFTTIQKFALNEEESRFPVLNER SNIIVISDEAHRSQYGFTQKLHKGKFQAGYARHLRDALPNASFIGFTGTPISLEDKDTQDVFGRYVSIYDLQDAVEDGAT VPIVYEARQIRLNEKEHDELFKEIDDLLEEEQSPALRLQEKLLGSQARLADLAADFVQHFAKRNEVVDSKAMMVVSSRQI CVDLYNEIIKLHPEWHSDNINEGAIKIVMTGSASDAPEMQKHVYSKQEKQTLERRFKDPNDPLKVVIVRDMWLTGFDAPC CNTMYIDKPMQGHNLMQAIARVNRVFRNKSRENGGLIVDYVGIAEKLKEATQQYTNSQGKGKLTDNVIDVFFKMKEHLEF VRSLFATPVEGKTFDVQTALEKDDPKDLLVEIRFAANHILGLDRLPFEGKAHEQHWFNKKETEPRKKAFLKAAGLVKKGY MLCGALAEVEPYNQEIAFYDAVRAILTKRDQNGTGSNERQILLKKLVNQAVYSEGVIDLFDLLEKPQPQINLLSEEFLQT IKNSPTKNLWVSAVERYLASEIKAKSGANLTLQKDFEQRLKEALNQYHNHNLSVVEILDELFKMSQDFQERLALGEKLGL KKEELAFYEALAQNQSARELMGDEVLSKLAKEITDTLRRSVTIDWQYKEGVRAKMRILVKRALQRYKYPPDKQEEAVSYV IKQAEEIAEDLTAEKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 42 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 42 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 42 |
