Gene Information

Name : PARA_15120 (PARA_15120)
Accession : YP_004823198.1
Strain : Haemophilus parainfluenzae T3T1
Genome accession: NC_015964
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1522226 - 1523632 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGGCCTCACAACGACAAATCCAATCTCCTGATCAGAAAACTGAACAAGTTAGCATCCCGCCTCATTCCACTGAAGCTGA
ACAAGCCGTACTCGGCGGCATTATGTTGAGTAATCAACATTGGGATGGTATTGCAGAAAGAGTCATTGCTGAGGATTTTT
ATACTTTTGCGCATAAAGCAATCTTCCAAACCATGGAAGAATTAATGCGTAATCAAACCCCGATTGATTTAATCACCCTT
GATCAAGCCCTTAAAGCGAAAGGTATTAGTGATTCTGTAGGCGGTTTTGCTTATTTAGCGGATCTTTCTAATAACACCCC
AAATGCCATTAATATTTTGGCTTATGCCGAAATCGTGCGTGAAAAAGCGATTTTGCGTGAGCTTATTGCAGTAGGGAATC
GTATCGCAGAAAACAGCTATTCTCCGAAAGGCAAAGACATCAAAATGGTGTTAGATGAAGCTGAAAGAGAAGTGTTTGCT
ATTGCTGAAAAACGCAGTTCTTCAACTGAAGGGCCACAAAATGTGATCAGCGTGTTGGAAAGTACTATTGCTCGAATTGA
TACCTTAAGTAAGCTTGAAAATCATAGCGGTGTGACAGGGGTCACAACGGGCTTTGTTGACTTAGATAAGAAAACAGCAG
GTTTACAGCCTTCAGACCTCATCATTGTCGCTGCACGTCCTTCTATGGGTAAAACCACGTTTGCGATGAACCTTTGTGAA
AATGCCGCCATGGCAAGTGATAAGCCTGTGTTGGTATTCAGTTTAGAGATGCCTGCGGAACAAATCATGATGCGTATGAT
TGCCTCTCTTGCTCGCGTGGACCAAACCAAAATTCGTACTGGTCAAAATTTGGATGAAACGGAATGGAGCAAAATTGCCA
GCGTGTTTGGGATGTTTAAGCAAAAAAACAATCTTTATATTGATGACTCATCTGGTTTAACCCCAACAGAATTACGTTCT
CGCGCGCGTCGCGTGTATCGCGAAAATGGGGGCTTGAGTATGATTATGGTGGATTACCTTCAATTAATGCGCGTGCCTGG
ATTTTCAGATAACCGTACCTTAGAAATCGCTGAGATTTCCCGTTCTTTAAAAGCATTAGCGAAAGAATTAGAAGTTCCTG
TCATTGCACTTTCCCAGCTTAACCGTACTTTGGAACAACGTGCAGATAAACGTCCGGTAAACTCAGACTTACGTGAATCA
GGCTCTATTGAGCAGGATGCTGACTTGATTATGTTCATTTATCGTGACGAAGTGTATAACGATAATTCCGAAGATAAAGG
GGTTGCTGAAATCATTATTGGTAAACAACGTAACGGTCCGATTGGTCGTGTACGTTTAGCATTTAACGGTCAATTCTCAC
GCTTTGATAACCTTGCCGAACAGCGTGAATACAGAGATGATTATTAG

Protein sequence :
MASQRQIQSPDQKTEQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIAEDFYTFAHKAIFQTMEELMRNQTPIDLITL
DQALKAKGISDSVGGFAYLADLSNNTPNAINILAYAEIVREKAILRELIAVGNRIAENSYSPKGKDIKMVLDEAEREVFA
IAEKRSSSTEGPQNVISVLESTIARIDTLSKLENHSGVTGVTTGFVDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCE
NAAMASDKPVLVFSLEMPAEQIMMRMIASLARVDQTKIRTGQNLDETEWSKIASVFGMFKQKNNLYIDDSSGLTPTELRS
RARRVYRENGGLSMIMVDYLQLMRVPGFSDNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLEQRADKRPVNSDLRES
GSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLAFNGQFSRFDNLAEQREYRDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 6e-98 51
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 8e-101 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-100 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-100 50
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-96 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-83 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-89 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-89 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-81 45