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Name : PARA_12090 (PARA_12090) Accession : YP_004822901.1 Strain : Haemophilus parainfluenzae T3T1 Genome accession: NC_015964 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 1200649 - 1202694 bp Length : 2046 bp Strand : - Note : - DNA sequence : ATGAAACTTTTCTTATGTGAAAAACCATCACAAGGTAATGATATTGCAAAAATATTAGGCGCGACAAAGCGTGGTGAAGG TTGTTTATCAACACCTGATGGTCAGCTTACAGTTACCTGGGGAATTGGTCATCTAGTAGAGCAATTTAATCCTGAAGAAT ATGATCCTGCCTTTAAAAAGTGGGCTTTTGAGACCTTGCCAATTATCCCGGGTAAATGGGGGCTTTCACCTAAAAAAGAA ACAAAAAAACAGTTCAACGTCGTAATGAAACTTATCAAACAAGCTAAACTTGTTGTCATTGCAACCGATATTGATAGAGA GGGCGAAACTATAGCAAGAGAATTGCTGGATTTAGCAGGATTTCGAGGGCAAATAAAACGCCTTTGGTTGTCTGCACTAG ATGATGCCAGTATTCGTAAAGCCTTGGGTGCGCTTAAAGATAATGAGGAGACTCTCCCTCTTTACTATGCAGGACTTGCA CGTAGTCGAGCAGATTGGCTTATTGGTATGAATTTCTCTCGTATCTATACCTTATTAGCGCAACAACAAGGGTATCAAGG GAAACCTTTAAGTGTTGGGCGGGTACAAACTCCAACATTAAGCCTGGTTGTTAATCGTGACCGTGAGATAAAAAACTTCA TTCCTAAGCAACATTTTGCTTTGCAAGTAATGCTTTCTGATGGAAATCAGCATTTTGCTACGCAATATGTTATTCCGGAG CAATATTGTGATCCTGATGGACTTTGTTTGTCTGCCCAAGTTATACAAGCAGCAAATCAGCAAATTCGTCAATTGGGCCA AGCGAAAATGGAATCAGTTGAAACTAAACGTGAAAGACAAAATGCTCCACTTTGCTTTGCATTAAGTGACTTACAATCAG AAGCTAACCGCCTTTATGGACTGGGTGCGCAAAGGGTATTGGATATAGCTCAATCACTCTATGAGACTCACAAAGCGACA ACCTATCCTAGAACAGATTGTGGTTATTTACCGGAGTCTCAGTTTGCTGAAGCCCCTAAAATTATCCAATGTTTATTGCA ATCCGATAATCGATTACAACCCCTTGCAGGTATGTTAAACCTTAATCAAAAATCACGAGTTTGGAATGATAAAAAAATTA CTGCTCACCATGGCATTATTCCGACTATGATTAAAGCTGATATTAGCAAAATGTCTGATGAAGAATTAAAGCTCTATGAT CTCATACGTCGTCGTTATTTAGCTCAATTCTTACCTGTTTCTGAAACAGATAAGACACAAATTATTTTGAAGTGCGGTCA ACATATATTAAGTGCACGTGGGAATGTGCTTATTGCTCCAGGTTGGAAAATTCTATTTGGCAAATCACTTGATGAAGATG ATGATGCACCTCAAGCCTTGCCGACGTTAAAGCAAGGACAAATCTGTCAGATTTCTGATTCAGAAATAAAAACCTTACAA ACATCACCACCTAATCACTTCACGGAAGGCACATTGCTCACCGCAATGAAAAATGCAGCTCGCTTTGTAACTGATGAGCG TTTAAAACAACGCTTACGAGAAACTGAAGGGCTTGGTACAGAAGCCACCCGGGCGGGAACGATTCAAGGTTTGATTGATA AAGGTTTCTTGAAAAAGAAAGGTAAATCACTATTAGCGACAGATGAAGCAATGACGCTAATTGATAATTTACCTCAGATG TTAAAAGATCCTGGTTTAACCGCACTTTGGGAGCAAGCGCTCAATCAAATTGCTGAAAGAACGCTTTCGCTAGAAGTGTT TATGCAAAAACAAGAAGTCTTTGTGCGGCATTTGATGGCTGATTGCCTTAAAAAGGGAATGAGTTTGGGGAATATTGAAA TTCGTAAATGCCCTAAGTGCGGTGCACCAATGATTAAAAGAAATGGTAAAAATGGGGCTTTTTTGGGGTGTTCTGCTTAT CCAAATTGCCAACATATTGAAAATTTTGATAGCAAAAAGAATACTAAGGGCGCGAAAAGTTCTAAGAAAACATCGAGTAA AAGTGTTAGCGAGCAAATTTCATCTTTACGAAGCTTATTGAATTAG Protein sequence : MKLFLCEKPSQGNDIAKILGATKRGEGCLSTPDGQLTVTWGIGHLVEQFNPEEYDPAFKKWAFETLPIIPGKWGLSPKKE TKKQFNVVMKLIKQAKLVVIATDIDREGETIARELLDLAGFRGQIKRLWLSALDDASIRKALGALKDNEETLPLYYAGLA RSRADWLIGMNFSRIYTLLAQQQGYQGKPLSVGRVQTPTLSLVVNRDREIKNFIPKQHFALQVMLSDGNQHFATQYVIPE QYCDPDGLCLSAQVIQAANQQIRQLGQAKMESVETKRERQNAPLCFALSDLQSEANRLYGLGAQRVLDIAQSLYETHKAT TYPRTDCGYLPESQFAEAPKIIQCLLQSDNRLQPLAGMLNLNQKSRVWNDKKITAHHGIIPTMIKADISKMSDEELKLYD LIRRRYLAQFLPVSETDKTQIILKCGQHILSARGNVLIAPGWKILFGKSLDEDDDAPQALPTLKQGQICQISDSEIKTLQ TSPPNHFTEGTLLTAMKNAARFVTDERLKQRLRETEGLGTEATRAGTIQGLIDKGFLKKKGKSLLATDEAMTLIDNLPQM LKDPGLTALWEQALNQIAERTLSLEVFMQKQEVFVRHLMADCLKKGMSLGNIEIRKCPKCGAPMIKRNGKNGAFLGCSAY PNCQHIENFDSKKNTKGAKSSKKTSSKSVSEQISSLRSLLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 0.0 | 68 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 9e-162 | 52 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-157 | 52 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-153 | 51 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-153 | 51 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-153 | 51 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-151 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 5e-143 | 47 |
