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Name : PARA_01090 (PARA_01090) Accession : YP_004821810.1 Strain : Haemophilus parainfluenzae T3T1 Genome accession: NC_015964 Putative virulence/resistance : Virulence Product : general secretory pathway component, cryptic Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 103353 - 104732 bp Length : 1380 bp Strand : + Note : - DNA sequence : ATGGCTTATCAAGCAATCGCAAAAAATGGCGAGATTTATCATATCTCGCCACAATATTGGCAACAAAACCAACAGCAACA AGCATTGCTGTTGCGTTACTTTGCGCTCCCTCTTAAAGAAGATGAACACCATTTATGGCTTGCAGTGGATTCACTCAATA ATCTTGCAGCTTGTGAAACCTTTGCTTTTTTAAGTGGAAAATTAGTCGAACCGATTTTATTTGAAACGGCCGAACTCAAA CAACTTTTACAATCCCTTGCGCCTAAAGCCAATCAAATCGAAGAGCAAACGACGTTTTATCATCATTCAGAAGACGAAAG CACTGCCAATTTATCTAATGATGATGAGCCCGTTATTCAATTATTAAATGGTATTTTTGAAACAGCCCTGCAAAAAAATG CCTCAGACATTCATTTAGAAACTCAGCCAAGTGGGCTATTAATTCGTTTACGTATTGATGGTGTGCTCCAACCGCAACCG ATTATTAGTAAAGCGCTCGCCAATCGTGTAATTTCTCGCCTCAAACTCTTAGCCAAACTGGATATTAGTGAAACTCGATT ACCACAAGATGGCCGCTTTCAATTCAAAACCACATTTTCCGATATTTTAGATTTCCGCCTTTCTACCTTGCCTACGCATT GGGGAGAAAAAGCAGTATTACGATTACAACAAAATAAACCTGTCCAACTAAGTTTTGCTGAGTTGGGTATGACACAAAAC CAACAAAGTCAATTTCAACATGCGCTCAGCCAACCGCAAGGTTTAATCCTAGTGACAGGCCCAACGGGAAGTGGAAAAAG TATCTCGCTTTATACCGCACTTCAATGGCTCAACACACCAGATAAACACATTATGACGGCAGAAGATCCCGTTGAAATTG AATTAGAAGGCATCATTCAAACTCAAGTAAATCCGCAAATCGGTTTAGATTTTAGCCGATTACTTCGTACATTTTTACGA CAAGATCCCGACATTATTATGCTTGGTGAAATTCGAGATGAAGAAAGTGCATTAATGGCATTAAGAGCCGCTCAAACCGG CCATTTAGTGCTTTCTACCTTACATACCAACGATGCCATCTCAGCTATTTCACGCTTACAACAACTAGGTATTCAATCTC ACGAAATTGAAAACAGTCTCTTATTAGTTATCGCACAACGATTGGTACGCAAACGTTGCTTAAAGTGCGGTCAACATTTC GGTAATTCTTGTGATTGCCATCAGGGGTATCAAGGCCGTATTGGGGTATATCAATTTTTACAATGCGAAAACAACCGTTA CCAAACTGATTTCGATTCACTTTATCAAAGCGCGTTAGAAAAAGTGAAAGATCACATCACTGATCTCGCCGAAATTCAAC GCGTGTTAGGTAAAAAATAG Protein sequence : MAYQAIAKNGEIYHISPQYWQQNQQQQALLLRYFALPLKEDEHHLWLAVDSLNNLAACETFAFLSGKLVEPILFETAELK QLLQSLAPKANQIEEQTTFYHHSEDESTANLSNDDEPVIQLLNGIFETALQKNASDIHLETQPSGLLIRLRIDGVLQPQP IISKALANRVISRLKLLAKLDISETRLPQDGRFQFKTTFSDILDFRLSTLPTHWGEKAVLRLQQNKPVQLSFAELGMTQN QQSQFQHALSQPQGLILVTGPTGSGKSISLYTALQWLNTPDKHIMTAEDPVEIELEGIIQTQVNPQIGLDFSRLLRTFLR QDPDIIMLGEIRDEESALMALRAAQTGHLVLSTLHTNDAISAISRLQQLGIQSHEIENSLLLVIAQRLVRKRCLKCGQHF GNSCDCHQGYQGRIGVYQFLQCENNRYQTDFDSLYQSALEKVKDHITDLAEIQRVLGKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-64 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-65 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PARA_01090 | YP_004821810.1 | general secretory pathway component, cryptic | VFG2426 | Protein | 1e-61 | 46 |
| PARA_01090 | YP_004821810.1 | general secretory pathway component, cryptic | VFG2048 | Protein | 8e-65 | 41 |
