Gene Information

Name : Entas_4535 (Entas_4535)
Accession : YP_004821594.1
Strain :
Genome accession: NC_015963
Putative virulence/resistance : Virulence
Product : Lytic transglycosylase catalytic
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 47368 - 47907 bp
Length : 540 bp
Strand : -
Note : PFAM: Lytic transglycosylase-like, catalytic; KEGG: enc:ECL_A141 lytic transglycosylase

DNA sequence :
ATGAAAATAACATTGTTACCCGTTGCTGTGCTGGCCGTTTCACTTTCGGCGGGCGCGGCTCCCCAGATGTGTTTTGACCA
GGCAGGAAAAGACTACCGTATTGATCCACTCCTGCTGATGTCAATTTCAATTAAGGAGAGCAGACTCCGGGCAGGTGCGA
TTAATGGAACAAACCGGAACGGGACAGAAGATGTTTGCGGGATGCAGGTGAACAGTTCTCATTATGGAAAGCTTAAAAAC
TTTAATATTACCCGTGACCGGTTGTTAAATGATCCCTGTATCTGTGTCTACACCGGCGCCTGGGTTCTGGCGCACAACTT
CCGGTCATATGGTAAAAACTGGGATAGCGTGGGAATGTATAATACCGGCCCCTCAAAAAAGCTCATCACTCAGCGCCGGG
CATATGCCGAAGATATTAAAAATATATACCGCGTCTTGCTGGCAAGAAAAACGATCCTTTCTCAGCGTCTGGATCAAGGT
GGGGGGATGGTAAATGAAGGGAAAACGGCAGAGACGGCATCACTGAATAACACGCAATAA

Protein sequence :
MKITLLPVAVLAVSLSAGAAPQMCFDQAGKDYRIDPLLLMSISIKESRLRAGAINGTNRNGTEDVCGMQVNSSHYGKLKN
FNITRDRLLNDPCICVYTGAWVLAHNFRSYGKNWDSVGMYNTGPSKKLITQRRAYAEDIKNIYRVLLARKTILSQRLDQG
GGMVNEGKTAETASLNNTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06358.1 unknown Not tested LEE Protein 4e-19 44
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 3e-18 43
unnamed AAK26704.1 unknown Not tested LEE Protein 1e-18 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 4e-18 43
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 4e-18 43
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 4e-18 43
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 2e-18 43
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 2e-18 43
unnamed AAC31524.1 L0045 Not tested LEE Protein 3e-18 43
unnamed AAL57531.1 unknown Not tested LEE Protein 1e-18 43
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 1e-18 43
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 1e-18 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 1e-17 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Entas_4535 YP_004821594.1 Lytic transglycosylase catalytic VFG0823 Protein 1e-18 43
Entas_4535 YP_004821594.1 Lytic transglycosylase catalytic VFG0719 Protein 5e-18 42