Gene Information

Name : Thewi_0847 (Thewi_0847)
Accession : YP_004819561.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 881608 - 882486 bp
Length : 879 bp
Strand : +
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Pyridoxal biosynthesis lyase pdxS; KEGG: thx:Thet_0693 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence :
ATGAATGAAAGGTATGAACTAAATAAAAATCTTGCCCAAATGCTAAAGGGTGGAGTCATAATGGATGTGACAACACCAGA
ACAGGCGGTTATTGCTGAAAAGGCAGGGGCTGTTGCAGTTATGGCTTTAGAGAGAGTGCCAGCTGATATTAGGGCAAGAG
GCGGAGTTGCAAGAATGTCAGACCCTAAAATAATAAAGGAGATAAAGGCAGCAGTATCAATCCCTGTTATGGCAAAAGTT
AGAATTGGGCATTTTGTGGAAGCACAGATTTTAGAGGCACTCGGGATAGATTTTATTGATGAAAGCGAAGTTTTAACCCC
TGCAGATGAGATGTACCATATAAACAAATGGGATTTTAAAGTGCCGTTTGTATGCGGTGCGAGAAACCTCGGAGAGGCTT
TAAGGCGCATAGGAGAAGGAGCTTCAATGATAAGGACAAAAGGAGAGGCAGGGACTGGAAATGTAGTAGAGGCTGTAAGG
CATATGAGGACGATAAATGCCGAAATAAAAAGGCTTACAACTTTAAGGGAAGACGAACTTATGGCTGCTGCAAAAGAACT
TCAGGCGCCCTATGACCTTGTAAAATATGTTGCACAACACGGAAGACTTCCAGTTGTGAATTTCGCAGCGGGAGGTATTG
CCACACCGGCAGACGCGGCACTTATGATGCAACTGGGTGCAGATGGAATTTTTGTGGGTTCAGGAATATTTAAATCGCAA
AACCCTGAGAAAATGGCAGCTGCTATAGTAAAAGCCACAGCATATTTTGATAGGCCGGAAATAATTGCGGAAGTTTCAGA
AGGGCTAGGAGAAGCGATGGCCAGCATAGATATAAGGCAACTGGAAGAAAAAGATTTATATGCAACAAGGGGATGGTAA

Protein sequence :
MNERYELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKV
RIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVR
HMRTINAEIKRLTTLREDELMAAAKELQAPYDLVKYVAQHGRLPVVNFAAGGIATPADAALMMQLGADGIFVGSGIFKSQ
NPEKMAAAIVKATAYFDRPEIIAEVSEGLGEAMASIDIRQLEEKDLYATRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-88 71
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-88 71
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-88 71