Gene Information

Name : Thewi_0550 (Thewi_0550)
Accession : YP_004819293.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 569289 - 569966 bp
Length : 678 bp
Strand : +
Note : KEGG: tbo:Thebr_1841 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence :
ATGGAAAAATTGTTGATTATAGACGATGAAGAGATGTTTGTAAAAGGTTTAAAACTTTCTTTAGAAGAAGAAGGGTTTGA
AGTTGATACTGCCTACGATGGAGAAGAAGGGCTTGATAAGGTTCGTTTAGGGAATTATGACCTTGTAATTTTAGATATTA
TGCTTCCTAAGTTAGACGGTTTTTCAGTGTGTAGAGAGATAAGGACTTTTTCAAATATTCCCATAATTATGCTTACTGCA
AGAGGAGATGATATTGACAAGATTGTAGGGATAGAAATAGGAGCTGATGATTATTTAGCGAAGCCCTTTAATACTAGAGA
GCTTATTGCGCGAATAAGAGCACTTTTAAGAAGAGCTACAAATCCTTATACTAAGAGGAAAGACGAAATAAGAAGGGGAG
AACTTTATATAAATATTCCAGAAAGAGCAGTTTACAAGAGAGGCAAGAGAATTGAGCTTACAAATAAAGAATTTGAAATT
TTAGTGTTGTTAGCTTCTAATCCAGGAAAAGTCTATACGAAAGATAAATTGTTAGACTTGATATGGGGATTTGATTTTTA
CGGTGATACTAATACTGTTACAGTGCATGTGAGAAAACTTAGAGAGAAAATTGAAGATGACCCTGCAAATCCTCAATATA
TTTTCACCAAATGGGGTGCAGGATACTATATGAAGTAA

Protein sequence :
MEKLLIIDDEEMFVKGLKLSLEEEGFEVDTAYDGEEGLDKVRLGNYDLVILDIMLPKLDGFSVCREIRTFSNIPIIMLTA
RGDDIDKIVGIEIGADDYLAKPFNTRELIARIRALLRRATNPYTKRKDEIRRGELYINIPERAVYKRGKRIELTNKEFEI
LVLLASNPGKVYTKDKLLDLIWGFDFYGDTNTVTVHVRKLREKIEDDPANPQYIFTKWGAGYYMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator AF155139.2.orf0.gene Protein 5e-37 47
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 2e-42 46
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-42 45
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 6e-45 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-37 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_013450.8614146.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002951.3238224.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_007793.3914065.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002758.1121390.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_010079.5776364.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_002952.2859858.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_007622.3794948.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_003923.1003417.p0 Protein 8e-31 44
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_014475.1.orf0.gen Protein 4e-34 43
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_005054.2598277.p0 Protein 4e-34 43
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator NC_012469.1.7686381. Protein 2e-35 43
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 9e-40 43
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator BAC0083 Protein 8e-29 43
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator BAC0125 Protein 4e-32 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator CP000675.2.gene1535. Protein 2e-33 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator AM180355.1.gene1830. Protein 4e-31 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 3e-36 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-35 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator CP000034.1.gene3671. Protein 9e-34 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator HE999704.1.gene1528. Protein 4e-32 41
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator BAC0308 Protein 8e-30 41
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator BAC0638 Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-30 42
Thewi_0550 YP_004819293.1 winged helix family two component transcriptional regulator VFG1389 Protein 3e-29 41