Gene Information

Name : Thewi_0254 (Thewi_0254)
Accession : YP_004819040.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 267954 - 268646 bp
Length : 693 bp
Strand : +
Note : KEGG: tbo:Thebr_2063 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGGATAACATTTTAATAAAAATAAGGAATTTAACAAAGATTTACAAAATGGGAGAAAATGAAGTAAGAGCGTTAGATGG
TATAAACCTTGACATTGAAAAAGGAGAATTTGTATCAATTGTCGGTCAATCAGGTTCAGGTAAAACTACTTTAATGAATA
TAATAGGGTGCTTAGATGTAAAAACTTCTGGAGAATATTTTTTAAATGGCATAGACACAAGCAAACTTTCTGACAATCAA
TTAGCAGATTTAAGATGTAGCGAAATAGGGTTTGTTTTTCAAAATTTCAATTTGCTTCAAAAAATGACGGCTTTAGAAAA
CGTGGAATTGCCTATGATATACAAAGGTGTACCTACGAAAGAAAGGCGGCAAAGAGCAGAGATGCTTTTAGAGATGGTAG
GACTTAAGGAAAGGATGCACCATAGACCTAATGAATTATCAGGAGGTCAGCAGCAAAGAGTAGCAATAGCAAGGGCACTA
GCAAACAATCCCCATCTAATATTAGCAGATGAGCCGACGGGAAACTTAGACTCAAAAAGTGGTAGTGAGATAATGAAAAT
AATAAAAGAGTTAAACGAGAGAGGGAATACAGTAGTACTTATAACTCATGACCCTAATATAGCTGCACAAGCCAAAAGAA
TAGTAAGAATAAAAGATGGGCGTATTTTAGAAAACGAGGTGGTAACACCGTGA

Protein sequence : 
MDNILIKIRNLTKIYKMGENEVRALDGINLDIEKGEFVSIVGQSGSGKTTLMNIIGCLDVKTSGEYFLNGIDTSKLSDNQ
LADLRCSEIGFVFQNFNLLQKMTALENVELPMIYKGVPTKERRQRAEMLLEMVGLKERMHHRPNELSGGQQQRVAIARAL
ANNPHLILADEPTGNLDSKSGSEIMKIIKELNERGNTVVLITHDPNIAAQAKRIVRIKDGRILENEVVTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-35 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thewi_0254 YP_004819040.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-61 57
Thewi_0254 YP_004819040.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-44 48
Thewi_0254 YP_004819040.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-44 45
Thewi_0254 YP_004819040.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-41 44