Gene Information

Name : Thewi_2313 (Thewi_2313)
Accession : YP_004820945.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2355326 - 2356825 bp
Length : 1500 bp
Strand : -
Note : TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: thx:Thet_2106 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type

DNA sequence : 
ATGTCTAATTCAAATGATAACATTTGGAACAACACTGAAGAACTCAATGAACTTTTGCGAATAAGAAGAGAAAAATTAAA
TATTTTAAGAAGCATGGGAGTAGAACCTTACGGTATTGACAGGTTTGAAAGGACTAATGTATCCTCTGATATTAAAAACG
ATTACGAGAATTTTGAAGGCAAAGTAGTGACTCTTGCAGGACGAATTATGTCCAAAAGAGCCCATGGCAAAGCTTCTTTT
GCAGATATTCAAGATAGAGATGGCAGGATACAGATTTACATTAAGTATGATACAGTAGGAGAGAAGAATTATGAAATTTT
TAAAATCCTCGACATTGGAGATATAATAGGGGTTACAGGCGAGGTATTTAAATCTAAAACTGGTGAAATAACTATTCGCG
TAACAGACTTTAAGCTTTTGTCTAAATCTCTTCAAATACTTCCAGAGAAATGGCACGGTTTAAAAGACCCTGATTTGCGT
TATAGACAGAGATATACGGATTTAATAATAAATCCCGAAGTAAAAGAGGTATTTTTAAAGAGGACGAAAATAATAAAGGC
GATAAGAGAATTTCTTGACAATAGAGGATTTTTAGAAGTGGAGACTCCTATTCTTCATACTATTGCGGGTGGGGCTGCAG
CACGACCTTTTATTACTCATCACAATGCTTTAGACATTGATATGTACTTGCGAATTGCTTTAGAGCTTCACTTAAAAAGA
CTTATTGTGGGTGGACTTGAAAAAGTATATGAAATGGGCAGAGTTTTTAGAAATGAAGGAATGGATATAAGGCACAATCC
GGAATTTACTTTGTTGGAACTTTACGAAGCCTATACGGATTATTACGGTATGATGGAACTTACAGAACAATTATTTGCCT
ATGTGGCCCAAAAGGTTAACGGTACTACGAAAATAGTTTATCAAGGGACAGAAATAGATTTGACACCTCCTTGGAAGAGA
ATTACTATGGTGGATGCAATAAAAGAATATGTAGGTGTAGACTTTAATGAAGTTAAGACAGATGCAGAAGCAGTAGAGAT
AGCGAAGAGATTAAACCTTGAGACAAAAGAAGGAATGAAAAAGGGAGAAGTAATAGCACTTGTTTTTGATGAGCTGGTAG
AACAACATTTGATACAGCCAACTTTTGTTATGGATTATCCTGTAGAGATTTCTCCTTTAGCTAAGAGAAAACACGACAAT
CCAGCATTTACTTCTAGATTTGAAGCCTTTATTTACGGAAGAGAAGTGGCTAATGCCTTTTCAGAATTAAATGACCCTAT
AGACCAAAAAGAAAGGTTTTTAGAACAATTAAAACAAAGAGAAGCCGGTGACGAAGAAGCCCATATGATGGATGAAGATT
TTATAAATGCTCTTGAGGTTGGTATGCCACCGACTGGAGGATTGGGCATAGGGGTAGACAGACTTGTGATGTTTATGACA
GATGCTTATTCTATAAGAGATGTGATATTATTCCCGACAATGAAACCTAGAAATGATTAG

Protein sequence : 
MSNSNDNIWNNTEELNELLRIRREKLNILRSMGVEPYGIDRFERTNVSSDIKNDYENFEGKVVTLAGRIMSKRAHGKASF
ADIQDRDGRIQIYIKYDTVGEKNYEIFKILDIGDIIGVTGEVFKSKTGEITIRVTDFKLLSKSLQILPEKWHGLKDPDLR
YRQRYTDLIINPEVKEVFLKRTKIIKAIREFLDNRGFLEVETPILHTIAGGAAARPFITHHNALDIDMYLRIALELHLKR
LIVGGLEKVYEMGRVFRNEGMDIRHNPEFTLLELYEAYTDYYGMMELTEQLFAYVAQKVNGTTKIVYQGTEIDLTPPWKR
ITMVDAIKEYVGVDFNEVKTDAEAVEIAKRLNLETKEGMKKGEVIALVFDELVEQHLIQPTFVMDYPVEISPLAKRKHDN
PAFTSRFEAFIYGREVANAFSELNDPIDQKERFLEQLKQREAGDEEAHMMDEDFINALEVGMPPTGGLGIGVDRLVMFMT
DAYSIRDVILFPTMKPRND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-112 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thewi_2313 YP_004820945.1 Lysyl-tRNA synthetase VFG1668 Protein 2e-112 50