Gene Information

Name : Thewi_0220 (Thewi_0220)
Accession : YP_004819008.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Unknown
Product : Xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 231043 - 232359 bp
Length : 1317 bp
Strand : +
Note : TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: tbo:Thebr_2104 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain

DNA sequence :
ATGGAATACTTCAAGAATGTACCACAAATAAAATATGAAGGGCCAAAATCAAACAACCCATATGCATTCAAATTTTACAA
TCCTGACGAAATAATAGACGGAAAACCTTTAAAAGAACACTTGCGTTTTTCAGTGGCATACTGGCACACATTTACATGGA
GTGGGACAGATCCATTTGGAGCACCTACAATGCAAAGGCCGTGGGACCATCTAAGTGATCCTATGGATATTGCCAAAGCG
AGAGTAGAAGCAGCTTTTGAATTATTTGAAAAACTCGACGTACCATTTTTCTGCTTTCATGACAGAGATATAGCTCCGGA
AGGAGAGACATTAAGAGAGACAAACAAAAATTTAGATACAATAGTTGTAATGATAAAAGACTACTTAAAGACGAGTAAAA
CAAAAGTATTATGGGGTACAGCAAATCTTTTTTCAAATCCGAGATTTGTACATGGTGCAGCTACTTCCTGTAATGCAGAC
GTATTTGCATATGCAGCGGCGCAAGTAAAGAAAGCCCTTGAGATAACAAAAGAACTTGGAGGACAGAACTATGTATTTTG
GGGTGGAAGAGAAGGATATGAAACATTACTCAATACAGATATGGAATTGGAATTTGATAACTTAGCAAGATTTTTACATA
TGGCAGTAGAATATGCACAAGAGATAGGATTTGAAGGGCAGTTTTTAATTGAGCCAAAACCTAAAGAACCGACAAAACAC
CAATATGATTTTGATGCAGCAAGTGTACATGCATTTTTAAAGAAGTACGACCTTGATAAATACTTCAAATTAAACATAGA
AGCGAACCATGCCACACTTGCAGGACATGACTTTCAACATGAATTAAGATATGCAAGAATTAACAATATGTTAGGGTCTA
TAGATGCAAATATGGGAGATATGCTTTTAGGATGGGATACAGACCAATATCCAACAGACATACGAATGACAACCCTTGCG
ATGTATGAAGTCATAAAGATGGGAGGTTTTAACAAAGGTGGACTTAACTTCGATGCGAAAGTAAGGCGTGCCTCCTTTGA
GCCAGAAGATTTATTTTTAGGGCATATAGCGGGTATGGATGCATTTGCAAAAGGATTTAAAGTAGCGTATAAGATTGTTA
AAGATGGTGTATTTGATAGATTTATAGAAGAAAGATACAAAAGTTATCGAGAAGGCATAGGAGCAGAAATAGTAAATGGA
AAAGCGAACTTTAAAACTCTTGAAGAATATGCATTAAACAATCCAAAGATTGAGAACAAATCAGGCAAGCAAGAGTTGTT
AGAGTCAATATTAAATCAGTATTTATTTAGTGAATGA

Protein sequence :
MEYFKNVPQIKYEGPKSNNPYAFKFYNPDEIIDGKPLKEHLRFSVAYWHTFTWSGTDPFGAPTMQRPWDHLSDPMDIAKA
RVEAAFELFEKLDVPFFCFHDRDIAPEGETLRETNKNLDTIVVMIKDYLKTSKTKVLWGTANLFSNPRFVHGAATSCNAD
VFAYAAAQVKKALEITKELGGQNYVFWGGREGYETLLNTDMELEFDNLARFLHMAVEYAQEIGFEGQFLIEPKPKEPTKH
QYDFDAASVHAFLKKYDLDKYFKLNIEANHATLAGHDFQHELRYARINNMLGSIDANMGDMLLGWDTDQYPTDIRMTTLA
MYEVIKMGGFNKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKIVKDGVFDRFIEERYKSYREGIGAEIVNG
KANFKTLEEYALNNPKIENKSGKQELLESILNQYLFSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-116 60
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-116 60