Gene Information

Name : Thewi_1175 (Thewi_1175)
Accession : YP_004819882.1
Strain : Thermoanaerobacter wiegelii Rt8.B1
Genome accession: NC_015958
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1202068 - 1202760 bp
Length : 693 bp
Strand : -
Note : KEGG: tbo:Thebr_1058 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGATTGAGCTAAGCAATGTAAAAAAGGTGTACAATCTTGGAAAGATACAAGTTGATGCATTAAAAGGCGTATCTTTAAA
AATAGATAAAGGTGAATATGTAGCAATTGTCGGTCCTTCTGGCTCTGGCAAATCCACTTTAATGAACATTATAGGCCTTT
TAGATAAACCTACATCTGGAAGTTATAAACTCAATGGAACTGAAGTATCAACCCTAAGCGATGACCAGTTAGCTTATTTG
AGAAATCGTCAGATAGGATTTGTCTTTCAATCTTTTAACCTTTTGAGCAAATTGAACGCACTGGCAAATGTAGAACTGCC
AATGTTGTACGCCAAAATACCATCAAAAGAACGAAGGCAAAGAGCCCTAAGAGCTTTAGAAATAGTGGGATTAAGTGAAA
GAATACACCACAAACCTAATGAGCTATCAGGAGGGCAGCAGCAAAGAGTTGCTATTGCCCGTGCTATTGTGATGAATCCT
TCTTTTTTGCTAGCAGACGAACCAACAGGAAATCTTGACACAGCTTCTAGCATTGAAATAATGAAAATCTTTTATCAACT
CAATGAATCGGGTACTACAATAGTAATGGTTACACATGAGCAAGATATTGCAAATCATGCAAAAAGGATAGTCCGCTTAA
GAGATGGAAATATTATAGAAGATACGCTTGTTCCAAACAGAATAACTTATTAG

Protein sequence : 
MIELSNVKKVYNLGKIQVDALKGVSLKIDKGEYVAIVGPSGSGKSTLMNIIGLLDKPTSGSYKLNGTEVSTLSDDQLAYL
RNRQIGFVFQSFNLLSKLNALANVELPMLYAKIPSKERRQRALRALEIVGLSERIHHKPNELSGGQQQRVAIARAIVMNP
SFLLADEPTGNLDTASSIEIMKIFYQLNESGTTIVMVTHEQDIANHAKRIVRLRDGNIIEDTLVPNRITY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-33 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 45
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thewi_1175 YP_004819882.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-57 59
Thewi_1175 YP_004819882.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-52 53
Thewi_1175 YP_004819882.1 ABC transporter-like protein CP001581.1.gene798.p Protein 9e-41 47
Thewi_1175 YP_004819882.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-39 44
Thewi_1175 YP_004819882.1 ABC transporter-like protein NC_012469.1.7686946. Protein 2e-30 42