Gene Information

Name : Strvi_1179 (Strvi_1179)
Accession : YP_004811215.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1012186 - 1012974 bp
Length : 789 bp
Strand : +
Note : KEGG: sma:SAV_3551 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGACAACGGCTGTATCGATTCCCAGGACCGGGGGCAGCGGAGGACATACGGCCGTCGCCGCCCGTGCACGTCAGGTGGT
CAAGGCGTATGGCTCGGGGGAGACCCGGGTGGTCGCGCTGGACCATGTGGACGTGGACATCGCCCGCGGGCAGTACACCG
CGATCATGGGCCCGTCCGGCTCCGGCAAGTCGACCCTGATGCACTGCCTGGCCGGTCTGGACACCGTCAGCTCCGGGCAG
ATCTTCATCGACGAGACCGAGATCACCGGGCTGAAGGACAAGAAGCTCACCAAGCTGCGCCGGGACCGGATCGGCTTCAT
CTTCCAGGCGTTCAACCTGCTGCCGACGCTCAGCGCGATCGAGAACATCACGCTGCCGATGGACATCGCGGGCCGTAAGC
CCGACCGGGCCTGGCTGGACCAGGTGGTGGAGACCGTGGGTCTGTCCGGCCGGCTCAAGCACCGTCCGAACCAGCTCTCC
GGCGGTCAGCAGCAGCGCGTCGCGGTGGCCCGCGCCCTCGCCGCCCGTCCCGAGATCATCTTCGGTGACGAGCCGACCGG
AAACCTGGACTCGCGGGCCAGTGCCGAGGTGCTGGGCTTCCTCAAGCGGTCGGTGGACGAGCTGGGCCAGACCATCGTGA
TGGTCACCCATGACCCGGTCGCCGCCTCCTACGCCAACCGTGTGCTGTACCTGGCCGACGGCCGGATCGTCGACGAGATG
TACAACCCGACGGCCGATCTGGTCCTGGAGCGCATGAAGCACTTCGACGCGCGAGGACGGGTGTCATGA

Protein sequence : 
MTTAVSIPRTGGSGGHTAVAARARQVVKAYGSGETRVVALDHVDVDIARGQYTAIMGPSGSGKSTLMHCLAGLDTVSSGQ
IFIDETEITGLKDKKLTKLRRDRIGFIFQAFNLLPTLSAIENITLPMDIAGRKPDRAWLDQVVETVGLSGRLKHRPNQLS
GGQQQRVAVARALAARPEIIFGDEPTGNLDSRASAEVLGFLKRSVDELGQTIVMVTHDPVAASYANRVLYLADGRIVDEM
YNPTADLVLERMKHFDARGRVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-32 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_1179 YP_004811215.1 ABC transporter CP001581.1.gene798.p Protein 9e-32 47
Strvi_1179 YP_004811215.1 ABC transporter CP001581.1.gene598.p Protein 2e-37 46
Strvi_1179 YP_004811215.1 ABC transporter NC_008702.1.4606598. Protein 2e-28 42
Strvi_1179 YP_004811215.1 ABC transporter NC_012469.1.7686878. Protein 2e-32 42
Strvi_1179 YP_004811215.1 ABC transporter NC_012469.1.7685735. Protein 2e-25 41