Gene Information

Name : Strvi_9061 (Strvi_9061)
Accession : YP_004818636.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 10466562 - 10467338 bp
Length : 777 bp
Strand : -
Note : KEGG: sco:SCO3755 ABC transporter ATP binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAAGAGGCAGTGGCGCGGCCGTACGACGGCCACCGCGGAGCAGACGGGGACCCGGCACCACGCGCTGACCCTGGACGG
GGTCACCCGGGAGTACCGGTCGGGGGTTGTGGCGCTGCACCCCATCCATCTGACGGTGCCGCGCGGACGGTTCCTCGCGG
TGATGGGCCCCTCGGGGTGCGGGAAGTCGACCTTGCTGCAGTGCGCCGCAGGGCTCGACCGGCCGACGGCGGGCACGGTG
CGCATCGGCGGCACCCAACTGTCCTCGCTGAACGAGGCGGCGCTGACCCGGCTGCGGCGGGAGCGGATCGGCTTCGTCTT
CCAGGCGCACCACCTGGTGCCGTCGCTGAGCGTCGCGGAGAACGTCGCCCTGCCGCTGATGCTCGGCGGCGAGAGCCCCG
GCGACCGGCATCTGCGGGCCCTCGCGGCGGTCGGGCTGGGGGACCGGGGCGGCGCCGTGCCGTCGGAGCTGTCCGGTGGG
CAGTGCCAGCGAGTGGCCATCGCCCGCGCGCTGGTGACCACGCCCGACATCGTCTTCGCCGACGAGCCGACGGGGGCGCT
GGACCCCGCCGCCGCGGAGGAGGTGCTGACGCTGCTGCGGCAGGCCGTCGACCGTGACGGCCATACGGTCGTCATGGTCA
CCCACGACCCGTTCGCCGCCGCCTGGGCCGACGAGGCGCTGTACCTGATGCGGGGGAAGCTGGTCTGGCGGCAGGAGCGG
CCGGAGGCGGCCGACATCCGCCGCGTCCTCAAGGAGCTGGGAGGGCGGACGGCATGA

Protein sequence : 
MKRQWRGRTTATAEQTGTRHHALTLDGVTREYRSGVVALHPIHLTVPRGRFLAVMGPSGCGKSTLLQCAAGLDRPTAGTV
RIGGTQLSSLNEAALTRLRRERIGFVFQAHHLVPSLSVAENVALPLMLGGESPGDRHLRALAAVGLGDRGGAVPSELSGG
QCQRVAIARALVTTPDIVFADEPTGALDPAAAEEVLTLLRQAVDRDGHTVVMVTHDPFAAAWADEALYLMRGKLVWRQER
PEAADIRRVLKELGGRTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-35 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_9061 YP_004818636.1 ABC transporter NC_008702.1.4606598. Protein 4e-38 46
Strvi_9061 YP_004818636.1 ABC transporter NC_012469.1.7686878. Protein 1e-40 45
Strvi_9061 YP_004818636.1 ABC transporter CP001581.1.gene798.p Protein 3e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_9061 YP_004818636.1 ABC transporter VFG2059 Protein 4e-15 42