Gene Information

Name : Strvi_8494 (Strvi_8494)
Accession : YP_004818083.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9796903 - 9797685 bp
Length : 783 bp
Strand : +
Note : KEGG: sgr:SGR_4446 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGACCACCACCCCCTTCGGCGTCGAAACCGCCCACCGCACGTCAGCGGCGGCCGCCCGGGCCACCGATCTCTCCAAGGT
CTACGGCGAAGGCGAGACCCAGGTCATCGCCCTGGACTCGGTCTCCGTCGAGTTCCGCCAGGCGGAGTACACCGCGATCA
TGGGCCCCTCGGGCTCCGGCAAGTCGACGCTGATGCACTGCATGGCGGGTCTCGACACGATCTCCAGCGGCTCGGCCCGG
ATCGGCGACGTCGAACTGACCACGCTCAAGGACAAGAAGCTCACCCAGCTACGCCGCGACAAGATCGGCTTCATCTTCCA
GGCGTTCAACCTGCTGCCGACGCTGAACGCGCTGGAGAACATCACCCTCCCTATGGACATCGCCGGTCGCAAGGCCGACG
CCGCGTGGCTGGACAAGGTCGTGGCCACGGTCGGTCTGGCCGGGCGGCTCAAGCACCGGCCCAACCAGCTGTCGGGTGGT
CAGCAGCAGCGCGTCGCGGTGGCCCGCGCCCTGGCCGGCCAGCCGGAGATCATCTTCGCCGACGAGCCGACCGGAAACCT
GGACTCCCGTTCCGGCGCCGAGGTCCTGGGCTTCCTGCGCAACTCGGTGCGGGAGATGGGCCAGACGATCGTGATGGTGA
CCCACGACCCGGTCGCCGCGTCCTACGCCGACCGCGTGGTCTTCCTCGCCGACGGCCGGATCGTGGACGACCTGCGCAAC
CCCACCGCCGACTCGGTCCTCGACCGCATGAAGCGCTTCGACGCCAAGGGCCGTACGAGCTGA

Protein sequence :
MTTTPFGVETAHRTSAAAARATDLSKVYGEGETQVIALDSVSVEFRQAEYTAIMGPSGSGKSTLMHCMAGLDTISSGSAR
IGDVELTTLKDKKLTQLRRDKIGFIFQAFNLLPTLNALENITLPMDIAGRKADAAWLDKVVATVGLAGRLKHRPNQLSGG
QQQRVAVARALAGQPEIIFADEPTGNLDSRSGAEVLGFLRNSVREMGQTIVMVTHDPVAASYADRVVFLADGRIVDDLRN
PTADSVLDRMKRFDAKGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_8494 YP_004818083.1 ABC transporter CP001581.1.gene598.p Protein 1e-35 48
Strvi_8494 YP_004818083.1 ABC transporter CP001581.1.gene798.p Protein 2e-26 46
Strvi_8494 YP_004818083.1 ABC transporter NC_012469.1.7686878. Protein 4e-29 46
Strvi_8494 YP_004818083.1 ABC transporter NC_008702.1.4606598. Protein 6e-28 44