Gene Information

Name : Strvi_8258 (Strvi_8258)
Accession : YP_004817858.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 9507613 - 9508344 bp
Length : 732 bp
Strand : -
Note : TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: sma:SAV_5170 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2

DNA sequence :
ATGTCTCGTATCGACGGCCGCACCCCCGACCAGCTCCGACCCGTGACCATCGAGCGCGGATGGAGCAAGCATGCCGAGGG
CTCGGTCCTCGTCTCCTTCGGCGATACGCGGGTCCTGTGCACCGCGAGCGTCACCGAGGGCGTGCCGCGCTGGCGCAAGG
GCAGCGGCGAGGGCTGGGTCACCGCGGAGTACGCGATGCTGCCGCGCTCCACCAACACCCGGGGCGACCGCGAGTCCGTC
CGCGGCAAGATCGGCGGCCGGACCCATGAGATCTCCCGTCTCATCGGCCGCTCGCTGCGCGCGGTGATCGACTACAAGGC
GCTCGGCGAGAACACCATCGTCCTGGACTGCGATGTCCTCCAGGCCGACGGCGGCACCCGCACCGCCGCCATCACCGGCG
CCTATGTGGCCCTGGCCGACGCCATCGGCTGGGCCCGGGGCAAGAAGCTCATCAAGGCCACCCGGCAGCCGCTGACCGGC
ACCGTCTCCGCCGTCAGCGTCGGCATCGTCGGCGGAATCCCCCTGCTCGACCTCTGCTACGAGGAGGACGTGCGCGCCGA
GACCGACATGAACGTGGTCTGTACCGGTGACGGACGCTTCGTCGAGGTGCAGGGCACGGCGGAGGGCGAGCCCTTCGCCC
GCGAGGAGCTGAACGGGCTGCTGGACCTCGCCGTGGCGGGCTGCGAGACCCTGGCCGGAATCCAGCGCGCGGCGCTCGCC
CTGGAGATGTGA

Protein sequence :
MSRIDGRTPDQLRPVTIERGWSKHAEGSVLVSFGDTRVLCTASVTEGVPRWRKGSGEGWVTAEYAMLPRSTNTRGDRESV
RGKIGGRTHEISRLIGRSLRAVIDYKALGENTIVLDCDVLQADGGTRTAAITGAYVALADAIGWARGKKLIKATRQPLTG
TVSAVSVGIVGGIPLLDLCYEEDVRAETDMNVVCTGDGRFVEVQGTAEGEPFAREELNGLLDLAVAGCETLAGIQRAALA
LEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-59 61