Gene Information

Name : Strvi_7771 (Strvi_7771)
Accession : YP_004817385.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 8830963 - 8831751 bp
Length : 789 bp
Strand : -
Note : KEGG: sma:SAV_3526 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGGTCCACTTACATGATTCGCGTGAGACGTCCGCCTCTGCCAGAGGCCCCGCCGAGGCTGCCCGTGCAGTGCACCTGAC
AAAGGTTTACGGCGAGGGCGAGACGAAGGTAGTTGCCCTGGACGCGGTGTCGGTGGCCTTCCGCCAGTCGGAGTTCACGG
CGATCATGGGACCTTCAGGCTCCGGTAAGTCGACCCTGATGCACTGCGTGGCCGGCCTCGACGCGGTGACGCACGGTTCG
GCCTACATCGGCGACACGGATCTGACCAAGCTCGGCGACAAGGAGCTCACGCACCTGCGCCGCGACAAGGTCGGCTTTGT
GTTCCAGGCGTTCAACCTGCTGCCTACGTTGAACGCGTTGGAGAACATCACGTTGCCGATGGACATCGCCGGTCGTACAC
CTGACCGGCGATGGATGGAGGCAGTCATCGAATCGGTCGGCCTGTCCGGACGGCTGCATCACCGGCCCGGTCAGCTCTCC
GGCGGCCAGCAGCAGCGCGTGGCCGTCGCTCGGGCGCTGGCCGCCAGGCCTGAGGTGGTGTTCGCCGACGAACCCACGGG
CAATCTCGACTCCCGCGCCGGCGCAGAGGTGCTGGGATTCCTCCGCAACTCGGTGCGAGATCTGGGACAGACCGTCGTCA
TGGTCACCCACGATCCGGTCGCCGCCTCCTACGCGTCTCGCGTCATCTTCCTCGCGGACGGTCGCATAGCCGATGAGATG
CACCAGCCCACTGCCGAAGCCGTGCTTGATCGTATGAAGCGGTTCGATGCCGCGGGCAGGACGAGCTGA

Protein sequence : 
MVHLHDSRETSASARGPAEAARAVHLTKVYGEGETKVVALDAVSVAFRQSEFTAIMGPSGSGKSTLMHCVAGLDAVTHGS
AYIGDTDLTKLGDKELTHLRRDKVGFVFQAFNLLPTLNALENITLPMDIAGRTPDRRWMEAVIESVGLSGRLHHRPGQLS
GGQQQRVAVARALAARPEVVFADEPTGNLDSRAGAEVLGFLRNSVRDLGQTVVMVTHDPVAASYASRVIFLADGRIADEM
HQPTAEAVLDRMKRFDAAGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_7771 YP_004817385.1 ABC transporter CP001581.1.gene798.p Protein 2e-36 46
Strvi_7771 YP_004817385.1 ABC transporter CP001581.1.gene598.p Protein 4e-41 44
Strvi_7771 YP_004817385.1 ABC transporter NC_012469.1.7686878. Protein 3e-40 44
Strvi_7771 YP_004817385.1 ABC transporter NC_008702.1.4606598. Protein 5e-31 41