|
Name : Strvi_7388 (Strvi_7388) Accession : YP_004817021.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Virulence Product : ABC transporter substrate-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0614 EC number : - Position : 8443055 - 8444089 bp Length : 1035 bp Strand : - Note : PFAM: Periplasmic binding protein; KEGG: sgr:SGR_5211 iron-siderophore ABC transporter substrate-binding protein DNA sequence : ATGTCCCTGCGCGTCCGCGGCAGTGCCGTCCTCGCCCTCGCCCTGACCGGGGCGCTGTCCCTCGCCGCCTGCGGATCGTC GGACGACGGGGACGGCGCCAAGCGCAACGGCGGGGGCGGCAAGTCCGTCGCCCAGGGCGGCAAGGACTTCGGCTCGGCGG CCGAGCAGACCGCGAAGATGGGCACGGACGCGGGGCCCGGCGCGTTCCCCCGCACCATCACCCACGCGATGGGCAAGACC GAGATTCAGAGCAAGCCGAAGCGGGTCGTGGTGCTCGACGTCGGCGAGCTGGACAACGTCGTCTCGCTGGGGCTGAAGCC GGTCGGCTACGCCCCCTCCGAGGGCGACCAGGCCATACCCGACTACCTCAAGAAGGACGCCGGGAACCCGAAGAACGTCG GCACCATCAACAACCTCAACCTCGAGGCCATCAACGCCCTCCACCCCGATCTGATCCTCGGCAGCAAGCTGCGCGCCGAG CCGCTCTACGACGAGCTGAAGCAGATCGCCCCGACCGTCTTCGCCATCCGCCCCGGCTTCACCTGGAAGGAGAACTACCT CCTCAACGCCGCGGCGCTGGACCGGACCGCCGACGCCCAGCGCGCACTCGACGCGTACGAGCGGAAGGCGAAGAAGCTCG GCGAGGACATCGGCCCCGACAAGCCGACCATCACCATGCTCCGCTTCATGCCGCAGGCCACCCGGCTCTACGCCAAGGCG TCCTTCATCGGCACCATCCTCGAGGACGTCGGCCTGCCGCGCCCGAAGAACCAGCGGATCAACGACCTCGCCGCCGAGAT CGGCCCGGAGCGGATCGGCGACGCCGACGCCGACTGGATCTTCACCGGTGTCTACGGCGACCCCAAGGCCACCAAGCGCG ACCAGGCGCAGTCCAACCCGCTGTGGAAGAAGCTGAAGGCGGTCAAGGCGGGCCGGGCCGAGAACGTCGACGAGGAGACC TGGTATCTGGGCCTCGGCGTCACCGCCGCGGACCGGGTCCTCGACGACCTCCGCGGCTACCTCGTCCACGGATGA Protein sequence : MSLRVRGSAVLALALTGALSLAACGSSDDGDGAKRNGGGGKSVAQGGKDFGSAAEQTAKMGTDAGPGAFPRTITHAMGKT EIQSKPKRVVVLDVGELDNVVSLGLKPVGYAPSEGDQAIPDYLKKDAGNPKNVGTINNLNLEAINALHPDLILGSKLRAE PLYDELKQIAPTVFAIRPGFTWKENYLLNAAALDRTADAQRALDAYERKAKKLGEDIGPDKPTITMLRFMPQATRLYAKA SFIGTILEDVGLPRPKNQRINDLAAEIGPERIGDADADWIFTGVYGDPKATKRDQAQSNPLWKKLKAVKAGRAENVDEET WYLGLGVTAADRVLDDLRGYLVHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagD | YP_003782433.1 | iron-siderophore binding protein | Virulence | PiCp 1 | Protein | 4e-74 | 50 |
| fagD | YP_005682400.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-74 | 50 |
| fagD | YP_005684491.1 | Iron siderophore binding protein | Virulence | PiCp 1 | Protein | 9e-74 | 50 |
| fagD | YP_005680310.1 | Iron siderophore binding protein | Not tested | PiCp 1 | Protein | 9e-74 | 50 |
