Gene Information

Name : Strvi_7274 (Strvi_7274)
Accession : YP_004816918.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 8316680 - 8318089 bp
Length : 1410 bp
Strand : +
Note : KEGG: scb:SCAB_66881 glutamine synthetase I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp

DNA sequence :
ATGTTCCAGAACGCCGACGACGCTCGGAAGTACATCTCGGACGAGGACGTCAAGTTCGTCGACGTCCGCTTCTGCGACCT
TCCCGGCGTCATGCAGCACTTCACCGTACCGGCGGAGGCGTTCGACCCGGACGAGGAGCTGGCCTTCGACGGCTCGTCGA
TCCGCGGCTTCCAGGCCATCCACGAGTCGGACATGGCCCTGCGCGCGGACCTCTCCACGGCGCGTGTCGACCCGTTCCGC
CGGGACAAGACCCTCAACATCAACTTCTTCATCCACGACCCGATCACGGGTGAGCAGTACAGCCGCGACCCGCGGAACAT
CGCCAAGAAGGCCGAGGCCTACCTCGCCTCCACCGGCATCGCGGACACCGCGTACTTCGGTCCGGAGGCGGAGTTCTACG
TCTTCGACAGCGTGCGCTTCGACACCAAGGCGAACGAGTCCTTCTACCACATCGATTCCGAGGCGGGCGCCTGGAACACC
GGCGCGCTCCAGGACAACCGTGGCTACAAGGTCCGCTACAAGGGCGGCTACTTCCCGACCCCGCCGGTCGACCACTTCGC
CGACCTGCGCGCCGAGATCAGCCTCGAGCTGAACAAGGCCGGTCTCCAGGTCGAGCGCCAGCACCACGAGGTGGGCACCG
CCGGCCAGGCCGAGATCAACTACAAGTTCAACACGCTGCTGGCCGCGGCCGACGATCTGATGCTGTTCAAGTACATCGTC
AAGAACGTGGCGTGGAAGAACGGCAAGACCGCGACCTTCATGCCGAAGCCGATCTTCGGTGACAACGGCTCGGGCATGCA
CGTCCACCAGTCGCTGTGGCAGGGCGGCTCCCCGCTCTTCTACGACGAGCAGGGCTACGCGGGCCTGTCGGACACCGCCC
GCTACTACATCGGCGGCATCCTCCGGCACGCCCCGTCGCTGCTCGCGTTCACCAACCCGACGGTGAACTCCTACCACCGC
CTGGTCCCGGGCTTCGAGGCACCGGTCAACCTGGTGTACTCGCAGCGTAACCGCTCCGCCGCGATGCGTATCCCGATCAC
CGGCTCCAACCCGAAGGCCAAGCGCGTCGAGTTCCGCGCCCCGGACTCCTCCGGCAACCCGTACCTGGCCTTCTCCGCCC
TGCTCCTCGCGGGTCTGGACGGCATCAAGAACAAGATCGAGCCGGCCGAGCCGATCGACAAGGACCTCTACGAGCTCGCC
CCCGACGAGCACGCGGGCGTCCCGCAGGTCCCGACCTCCCTCCCGGCCGTCCTCGACTCCCTCGAGGCCGACCACGAGTT
CCTCCTCCAGGGCGGGGTCTTCACCTCCGACCTGATCGAGACCTGGATCGACTACAAGCGCACCAACGAGATCGCGCCGC
TGCAGCTCCGTCCGCACCCGCACGAGTTCGAGCTCTACTTCGACGTGTGA

Protein sequence :
MFQNADDARKYISDEDVKFVDVRFCDLPGVMQHFTVPAEAFDPDEELAFDGSSIRGFQAIHESDMALRADLSTARVDPFR
RDKTLNINFFIHDPITGEQYSRDPRNIAKKAEAYLASTGIADTAYFGPEAEFYVFDSVRFDTKANESFYHIDSEAGAWNT
GALQDNRGYKVRYKGGYFPTPPVDHFADLRAEISLELNKAGLQVERQHHEVGTAGQAEINYKFNTLLAAADDLMLFKYIV
KNVAWKNGKTATFMPKPIFGDNGSGMHVHQSLWQGGSPLFYDEQGYAGLSDTARYYIGGILRHAPSLLAFTNPTVNSYHR
LVPGFEAPVNLVYSQRNRSAAMRIPITGSNPKAKRVEFRAPDSSGNPYLAFSALLLAGLDGIKNKIEPAEPIDKDLYELA
PDEHAGVPQVPTSLPAVLDSLEADHEFLLQGGVFTSDLIETWIDYKRTNEIAPLQLRPHPHEFELYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-87 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_7274 YP_004816918.1 glutamine synthetase, type I VFG1399 Protein 2e-167 72