Gene Information

Name : Strvi_7086 (Strvi_7086)
Accession : YP_004816733.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 8108659 - 8110089 bp
Length : 1431 bp
Strand : -
Note : KEGG: sgr:SGR_5516 pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta

DNA sequence :
ATGCGCCGAGCAAAAATCGTCTGTACTTTGGGACCCGCCACCGACTCGTACGAGCAGATCAAGGCACTCATCGAAGCCGG
AATGGATGTGGCCCGCTTCAACCTCAGCCACGGCACCTATGCCGAGCACGAGGAGCGTTATCGGCGAGTGCGCAAAGCCT
CGCTGGAAACCGGCCGCAGCGTCGGCATCCTCGCCGACCTTCAAGGTCCGAAGATTCGGCTCGGCCGCTTCCGTGAAGGA
CCGGTACTCCTTGAACGCGGAGACGAGTTCATCATCACGGTCGAACCCATCGAGGGCGACCGGTTCCGCTGCGGCACCAC
CTACGAGGGGCTGGCCGGCGACGTCAGCAAGGGTGAGCGGATCCTCGTCGACGACGGCCGTGTCACCCTCGAGGTCGTCG
ACATCGACGGCCCCCGCGTGCACACCATCTGCATCGAGGGCGGCATGATCTCCGACCACAAGGGGCTCAACCTCCCCGGC
GTGGCCGTCTCCGTCCCCGCGCTGTCCAAGAAGGACATCGAGGACCTGCGCTGGGCACTGCGCATCGGCGCCGATGTCAT
CGCCCTCTCCTTCGTCCGCAACGGCAACGACGTCGTGGACGTCCACCGGGTGATGGACGAGGAGGACCGCCGGCTCCCCG
TCATCGCCAAGATCGAGAAGCCGCAGGCGGTCGAGAACCTCGAGGGCATTGTCGACGCCTTCGACGGCATCATGGTCGCC
CGCGGCGACCTCGGCGTGGAGATGCCGCTCGAGCAGGTGCCGATGGTCCAGAAGCGCGCGATCAAGCTGGCCAAGCGGAA
CGCCAAGCCGGTGATCGTCGCGACCCAGATGCTCGACTCGATGATCGAGAACTCCCGCCCCACCCGCGCGGAGGCGTCCG
ACGTCGCCAACGCGATCATCGACGGCACGGACGCGGTGATGCTCTCCGGCGAGACCAGCGTCGGCAAGTACCCGATCGTC
ACGGTCAAGACGATGGGCCGCATCGTCGAGGCCGCCGAGGAGGACATCCTCGCCAAGGGCCTCCCCCCGCTCACCGAGCG
CAGCAAGCCCCGCACCCAGGGCGGCGCGGTGGCCCGCGCGGCGGCCGAGATGGGCGACTTCCTCGGCGCGAAGTTCCTCG
TCGCCTTCACCCAGTCCGGCGACACCGTCCGCCGCCTCTCCCGCTACCGCTCCCCGATCCCCCTCCTGGCCTTCACCCCG
GAACCGGGCACCCGCTCCCAGCTCAATCTGACCTGGGGCGTCGAGACCTTCCTCGGCCCGATGGTCAACTCCACGGACGA
GATGGTGGCCCAGGTGGACGAGGAACTGCTGCGCCTCGGCCGCTGCCGCAAGGGCGACCTCGTCATCATCACCGCCGGCT
CCCCGCCCGGCGTCTCCGGCTCCACCAACCTGGTCCGCGTCCACCACATCGGCACGGACGACCTGCGGTAG

Protein sequence :
MRRAKIVCTLGPATDSYEQIKALIEAGMDVARFNLSHGTYAEHEERYRRVRKASLETGRSVGILADLQGPKIRLGRFREG
PVLLERGDEFIITVEPIEGDRFRCGTTYEGLAGDVSKGERILVDDGRVTLEVVDIDGPRVHTICIEGGMISDHKGLNLPG
VAVSVPALSKKDIEDLRWALRIGADVIALSFVRNGNDVVDVHRVMDEEDRRLPVIAKIEKPQAVENLEGIVDAFDGIMVA
RGDLGVEMPLEQVPMVQKRAIKLAKRNAKPVIVATQMLDSMIENSRPTRAEASDVANAIIDGTDAVMLSGETSVGKYPIV
TVKTMGRIVEAAEEDILAKGLPPLTERSKPRTQGGAVARAAAEMGDFLGAKFLVAFTQSGDTVRRLSRYRSPIPLLAFTP
EPGTRSQLNLTWGVETFLGPMVNSTDEMVAQVDEELLRLGRCRKGDLVIITAGSPPGVSGSTNLVRVHHIGTDDLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-75 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-75 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-75 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 6e-75 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_7086 YP_004816733.1 pyruvate kinase VFG0479 Protein 1e-75 42