Gene Information

Name : Strvi_6871 (Strvi_6871)
Accession : YP_004816527.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 7874046 - 7875095 bp
Length : 1050 bp
Strand : -
Note : PFAM: Bacterial transport system permease; KEGG: sma:SAV_6491 ferrichrome ABC transport system permease

DNA sequence :
GTGACCCTGGTCAGTCCGGCGAAAGCCGGGACCGAGACAGCGAGCGCGCCGCCCCGGCGGCGCACCGCGGGCCGTGCGAC
AGGCCTGGTCGCCTCCCTGGGCGTGCTGCTGGCGATCGCCGCGGCGTCCATCGCGATCGGCGCCAAGCCGATTCCGCTGG
ACCAGGTGTGGCACGGGCTGTTCCACTACACCGGCAGCGACACCGATGTGGTGATCCGGGACGTACGGCTGCCGCGCACC
ATCCTCGGGCTGCTCGTCGGGGTCGGCCTCGGCCTCGCGGGCGCGGTCATCCAGGCCCTCACCCGCAACCCGCTCGCCGA
CCCCGGGCTGCTGGGGCTGAACGCGGGCGCGTCCGCCGCCGTCGTCTCGGCCATCAGCTTTCTCGGCGTCACCTCCCTGA
CCGGCTATGTGTGGTTCGCGTTCCTCGGCACCGCCGTCGTCTCCGTGCTGGTGTACGCGCTCGGCGGCAGCCGGAGCGCC
ACCCCGGTGCGGCTCGCGCTCGCCGGTACGGCGGTGTACGCGGCGCTCTACGGCTACGTCAACGCCGTGCAGCTACTGGA
CAGCGCGGCGCTCGACAAGATGCGCTTCTGGACGGTCGGTTCGCTCGCCTCCGCCAATATGACCGTGGTCCGGCAGGTGA
CCCCGTTCCTCCTGATCGGCGCGGTGCTCGCGCTCGCGCTCGGCCGTTCGCTCAATGCCGTGGCGCTCGGCGACGACACG
GCGCGCGCGCTCGGCACCAACCTCAACCGCACCCGGGCGCTCTCGATGGCCGCCGTCACCCTGCTGTGCGGGGCCGCGAC
CGCCGCCTGCGGGCCGATCGCGTTCGTCGGGCTGATCGTGCCGCATCTGGTCCGCGCGATCACCGGGCCCGACATGCGCT
GGATCCTGCCGTACGCCGCCGTGCTCTCGCCCGTTCTCCTGCTGGGCTCCGATGTGCTGGGGCGGCTGGTCACCCGGCCC
GCGGAACTGCAGGTCGGCATCGTCACCACGTTCATCGGCGGGCCCCTGTTCATCTATCTCGTACGCCGCCGAAGGATGGC
CCAACTGTGA

Protein sequence :
MTLVSPAKAGTETASAPPRRRTAGRATGLVASLGVLLAIAAASIAIGAKPIPLDQVWHGLFHYTGSDTDVVIRDVRLPRT
ILGLLVGVGLGLAGAVIQALTRNPLADPGLLGLNAGASAAVVSAISFLGVTSLTGYVWFAFLGTAVVSVLVYALGGSRSA
TPVRLALAGTAVYAALYGYVNAVQLLDSAALDKMRFWTVGSLASANMTVVRQVTPFLLIGAVLALALGRSLNAVALGDDT
ARALGTNLNRTRALSMAAVTLLCGAATAACGPIAFVGLIVPHLVRAITGPDMRWILPYAAVLSPVLLLGSDVLGRLVTRP
AELQVGIVTTFIGGPLFIYLVRRRRMAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-37 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_6871 YP_004816527.1 ABC transporter permease VFG0926 Protein 3e-34 48