Gene Information

Name : Strvi_6620 (Strvi_6620)
Accession : YP_004816286.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 7569622 - 7570893 bp
Length : 1272 bp
Strand : -
Note : PFAM: Transposase, mutator type; KEGG: sen:SACE_2334 transposase for IS3508i

DNA sequence :
ATGAACGACAACGAGATCCTGGCCGTCGGACCGGTCGAGGACGAGCTCGTGGATGAGGTCGTCGAGCGGTTGATGGACCG
CGCCGACGCCTCGGGTGCTGCCCTGCTGGGTGAAGGCGGGCTGCTGACCGAGGTGACCCGGGCCGTGCTGGAGCGGGCCC
TGGACGCGGAGATGACCGACCACCTCGGATACGAGAAACACGATCCCGCGGGCCACGGCTCGGGCAACAGCCGCAACGGC
ACATCGCGCAAGACGGTGCTGACCGATGCGGGGGCGGTCACACTGGCCGTTCCGAGGGACCGTGACGGGTCGTTCGAACC
GCAGTTGGTGCCCAAGCACGCCAGGCGGCTCGCGGGCTTCAACGAGCAGGTCCTGTCGCTGTACGCACGCGGCATGTCGG
TGCGCGACATCCGCTCGCACCTGGCCGGCATGTACGGCGTCGAGGTCTCACCGGACTTGATCAGCAAGGTCACCGACGCT
GTCACCGATGAGCTCGACGCATGGCGGAACAGACCGCTGGACGCGGTCTGGCCGATCATCTACATCGACGCGCTGTGGGT
GAAGATCCGCTCCGGATCCGTGGCCTCCCGGCCGGTCTACCTGGCCGTCGGGGTGGACATGGACGGCTGCAAGGACGTGC
TCGGCCTGTGGGCCGGCGACGAGGGCGAAGGCGCCACGACCTGGATGACCGTGCTGTCCGAGCTCCGTAACCGCGGGGTC
GAGGACGTGTGCATCGTCGCCTGCGACGGGCTGAAGGGCCTGCCCGACGCGGTCACTGCGACCTGGCCCAAAGCCACCGT
TCAGACATGCGTGATCCACTTGATCCGTGCCTCGCTGAGATTCGCCTCCAAACAGCACCACGCAAAGCTGGTCACGGAGT
TGAAGGCCATTTACACCGCCCCGACCGAGCAGGCCGCCGAGCAGGCCCTCGCCGACTTCACCGCAGGCGAGCTGGGCCAG
CGGTATCCCGCGATCGTGCGGACCTGGCAGGCCGCGTGGAGCGAATTCACCCCCTACCTCGCCTTCCCGCCGGAGATAAG
GAAGGTCGTCTACTCGACGAACCTGATCGAGTCGATCAACGCGCGGCTGCGGAAAGCCACCCGCAACCGCGGACACTTCC
CCTCCGAGCAGGCCGCGTTGAAGGTGCTCTACCTCGCCATCCGTGAGCAGGTCACCCCCAGAGCGCGCGATGTCAACCAC
GTCGCGGCACACTGGAAGAAGGCACTGAACCAGTTCTCACTCTTCTTCGAGGACCGGCTCAACCCCAAGTGA

Protein sequence :
MNDNEILAVGPVEDELVDEVVERLMDRADASGAALLGEGGLLTEVTRAVLERALDAEMTDHLGYEKHDPAGHGSGNSRNG
TSRKTVLTDAGAVTLAVPRDRDGSFEPQLVPKHARRLAGFNEQVLSLYARGMSVRDIRSHLAGMYGVEVSPDLISKVTDA
VTDELDAWRNRPLDAVWPIIYIDALWVKIRSGSVASRPVYLAVGVDMDGCKDVLGLWAGDEGEGATTWMTVLSELRNRGV
EDVCIVACDGLKGLPDAVTATWPKATVQTCVIHLIRASLRFASKQHHAKLVTELKAIYTAPTEQAAEQALADFTAGELGQ
RYPAIVRTWQAAWSEFTPYLAFPPEIRKVVYSTNLIESINARLRKATRNRGHFPSEQAALKVLYLAIREQVTPRARDVNH
VAAHWKKALNQFSLFFEDRLNPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 2e-90 51
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 6e-89 49
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 1e-85 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 5e-85 43