Gene Information

Name : Strvi_6474 (Strvi_6474)
Accession : YP_004816174.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 7364210 - 7365367 bp
Length : 1158 bp
Strand : -
Note : PFAM: Integrase, catalytic core; KEGG: integrase catalytic subunit

DNA sequence :
GTGATCGTGGAGGCACAGGTGCGTGACTACGGGTTTTCACCGGCTCAGCAGGATGAGGTCTGGAGACGCTGGCGCGAGGG
GCAGTCGTTCAGCTTGATCGGGCGGGCACTCGGGGCACCGATGCAGCACGCCCGCCGTTTCCTGTACCAGAGCGGCGGCG
TCCGCCTCACCCCGCAGAAGCGGTCAGAGCGGCATCTGAGCGGCAGCGAGCGCGAGGAGATATCCCGCGGTATCGCCGCC
GGGGAATCGGCCCGGCAACTGGCCAAGCGGCTGGGCCGATCCCCTTCGACCGTCTCCCGCGAGGTCGCCCGCAACGGCGG
CCGGGACCGCTACCGAGCCGCCTCGGCCGATGCGGCTGCCTACGAGCGCGGGCGCCGACCCAAGCAGGTCAAGCTCGCCC
AACGGCCCGCTCTGCGCGCCCTGGTGGAAACCAAGCTGGCTCTGTGCTGGTCACCCGAGCAGATCGCAGGATGGCTGCGA
CGGCAGTTTCCTGGTGACGCCTCCATGCAGATCTCGCACGAAGCGATCTACCTCTCGCTCTACGACCCTCGCCGGCGTCA
GGCGATCGACCGCAGCCTCACCCAGCGGCTGCGGTCAGGAAGACCCATGCGCCGACCGAAGATCGCCCGCCGGCCCACCG
GGCGGGGGATCATCCGCGGCATGGTGTCCATCACGGCCCGCCCCGCCGAAGTCGAGGACCGCAAGGTACCCAGCCATTGG
GAGGGCGACCTCGTGATGGGCACCCGGCCCTCTGCGGTCGCCACGCTCGTCGAGCGCACCAGCCGCTACACGGCCATCGT
CGCGCTGCCGGACGGCATCAAGGCTGAGCAGGTCACTCCGCACCTCACCAGGAGTCTCCTCGGCATCCCGCCCCAGCTAC
GGCGGACGCTCACCTGGGACCGGGGCCGGGAGATGGCCGAGCACCAGGCCATCACCGCCGGGACCGGGATGCCGATCTAC
CTCTGCAAGCCGCGCAGCCCGTGGCAGCGCGGCACCAACGGGAACACCAACCGACTGCTTCGGCAGTACCTGCCCAAGGG
CGCGGACCTCCGCACGTTCAGCCAGGCGACCTGGACGCCATCGCCCATGAGCTCAACCATCGCCCACGCAAGACCCACGG
GTACCGCACTCCGGCAGAGGTCTACGCTGACCTCCTGA

Protein sequence :
MIVEAQVRDYGFSPAQQDEVWRRWREGQSFSLIGRALGAPMQHARRFLYQSGGVRLTPQKRSERHLSGSEREEISRGIAA
GESARQLAKRLGRSPSTVSREVARNGGRDRYRAASADAAAYERGRRPKQVKLAQRPALRALVETKLALCWSPEQIAGWLR
RQFPGDASMQISHEAIYLSLYDPRRRQAIDRSLTQRLRSGRPMRRPKIARRPTGRGIIRGMVSITARPAEVEDRKVPSHW
EGDLVMGTRPSAVATLVERTSRYTAIVALPDGIKAEQVTPHLTRSLLGIPPQLRRTLTWDRGREMAEHQAITAGTGMPIY
LCKPRSPWQRGTNGNTNRLLRQYLPKGADLRTFSQATWTPSPMSSTIAHARPTGTALRQRSTLTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39292.1 - Not tested LPA Protein 3e-60 44