|
Name : Strvi_6430 (Strvi_6430) Accession : YP_004816146.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Unknown Product : transposase mutator type Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 7325670 - 7326941 bp Length : 1272 bp Strand : + Note : PFAM: Transposase, mutator type; KEGG: sen:SACE_2334 transposase for IS3508i DNA sequence : ATGAACGACAACGAGATCCTGGCCGTCGGACCGGTCGAGGACGAGCTCGTGGATGAGGTCGTCGAGCGGTTGATGGACCG CGCCGACGCCTCGGGTGCTGCCCTGCTGGGTGAAGGCGGGCTGCTGACCGAGGTGACCCGGGCCGTGCTGGAGCGGGCCC TGGACGCGGAGATGACCGACCACCTCGGATACGAGAAACACGATCCCGCGGGCCACGGCTCGGGCAACAGCCGCAACGGC ACATCGCGCAAGACGGTGCTGACCGATGCGGGGGCGGTCACACTGGCCGTTCCGAGGGACCGTGACGGGTCGTTCGAACC GCAGTTGGTGCCCAAGCACGCCAGGCGGCTCGCGGGCTTCAACGAGCAGGTCCTGTCGCTGTACGCACGCGGCATGTCGG TGCGCGACATCCGCTCGCACCTGGCCGGCATGTACGGCGTCGAGGTCTCACCGGACTTGATCAGCAAGGTCACCGACGCT GTCACCGATGAGCTCGACGCATGGCGGAACAGACCGCTGGACGCGGTCTGGCCGATCATCTACATCGACGCGCTGTGGGT GAAGATCCGCTCCGGATCCGTGGCCTCCCGGCCGGTCTACCTGGCCGTCGGGGTGGACATGGACGGCTGCAAGGACGTGC TCGGCCTGTGGGCCGGCGACGAGGGCGAAGGCGCCACGACCTGGATGACCGCGCTGTCCGAGCTCCGTAACCGCGGGGTC GAGGACGTGTGCATCGTCGCCTGCGACGGGCTGAAGGGCCTGCCCGACGCGGTCACTGCGACCTGGCCCAAAGCCACCGT TCAGACATGCGTGATCCACTTGATCCGTGCCTCGCTGAGATTCGCCTCCAAACAGCACCACGCAAAGCTGGTCACGGAGT TGAAGGCCATTTACACCGCCCCGACCGAGCAGGCCGCCGAGCAGGCCCTCGCCGACTTCACCGCAGGCGAGCTGGGCCAG CGGTATCCCGCGATCGTGCGGACCTGGCAGGCCGCGTGGAGCGAATTCACCCCCTACCTCGCCTTCCCGCCGGAGATAAG GAAGGTCGTCTACTCGACGAACCTGATCGAGTCGATCAACGCGCGGCTGCGGAAAGCCACCCGCAACCGCGGACACTTCC CCTCCGAGCAGGCCGCGTTGAAGGTGCTCTACCTCGCCATCCGTGAGCAGGTCACCCCCAGAGCGCGCGATGTCAACCAC GTCGCGGCACACTGGAAGAAGGCACTGAACCAGTTCTCACTCTTCTTCGAGGACCGGCTCAACCCCAAGTGA Protein sequence : MNDNEILAVGPVEDELVDEVVERLMDRADASGAALLGEGGLLTEVTRAVLERALDAEMTDHLGYEKHDPAGHGSGNSRNG TSRKTVLTDAGAVTLAVPRDRDGSFEPQLVPKHARRLAGFNEQVLSLYARGMSVRDIRSHLAGMYGVEVSPDLISKVTDA VTDELDAWRNRPLDAVWPIIYIDALWVKIRSGSVASRPVYLAVGVDMDGCKDVLGLWAGDEGEGATTWMTALSELRNRGV EDVCIVACDGLKGLPDAVTATWPKATVQTCVIHLIRASLRFASKQHHAKLVTELKAIYTAPTEQAAEQALADFTAGELGQ RYPAIVRTWQAAWSEFTPYLAFPPEIRKVVYSTNLIESINARLRKATRNRGHFPSEQAALKVLYLAIREQVTPRARDVNH VAAHWKKALNQFSLFFEDRLNPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 6e-90 | 50 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 1e-88 | 48 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 2e-85 | 46 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 1e-84 | 43 |
