Gene Information

Name : Strvi_6051 (Strvi_6051)
Accession : YP_004815823.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6936783 - 6937592 bp
Length : 810 bp
Strand : -
Note : KEGG: nda:Ndas_1610 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAACGACTCCCTTCCACCCGCCACCTCGGATGCGGCACCCGGACTCCGCGCGGACCGCGTCAGCCGCCGCGCCGACGG
CCGGCTCATCGTCGACGGCATCACCCTCACCCTGCTCCCCGGCGAGACGCTGGGCCTCCTCGGCCCCAACGGCTCCGGGA
AATCCACCCTGCTGCGGCTGCTCGCCGGGATCCTCGCCCCCTCCGCCGGAGTCGTCACCCTGGACGGCCGCGCACTGCCG
CGGGTCGGCCGCCGCGCCACGGCCCGCCGTATCGCCACCGTCGAACAGCACGCCCACACCCAGACCGAACTGACCGTCCG
CGAGGTCGTGGCCCTTGGCCGCATCCCGCACCGGCGCGCCTGGTCGTCGTCCACCGCCGCGGACACCCGGGCCGTCGACG
CGGCCCTGGAGCGCACCGCACTGACCGACCGGGCGGGTCAGTCGTGGCACACCCTCTCCGGTGGCGAGCGCCAGCGCGCC
CAGATCGCCCGGGCCCTCGCCCAGGAACCGTACGAGCTGCTGCTCGACGAGCCGACCAACCACCTCGACATCCAGCACCA
GCTCGACCTGCTCGACCTCGTCGTCGGTCTGCCGATCGCCACCGTGATCGCCCTCCACGACCTCAACCTCGCGGCGATGT
ACTGCGACCGCCTGCTCGTCCTCCGCGAGGGACACGTCGTGGCCGAGGGCACCCCCAGCCAGGTGCTGACCCCGTCCTTG
ATCAAGCAGGTCTACGACGTCCAGGCCGATGTCACCCACGATCCGGGCCACCCGGTCATCCGCTTTCTGCGCCGCACACC
GAAGCCGTGA

Protein sequence : 
MNDSLPPATSDAAPGLRADRVSRRADGRLIVDGITLTLLPGETLGLLGPNGSGKSTLLRLLAGILAPSAGVVTLDGRALP
RVGRRATARRIATVEQHAHTQTELTVREVVALGRIPHRRAWSSSTAADTRAVDAALERTALTDRAGQSWHTLSGGERQRA
QIARALAQEPYELLLDEPTNHLDIQHQLDLLDLVVGLPIATVIALHDLNLAAMYCDRLLVLREGHVVAEGTPSQVLTPSL
IKQVYDVQADVTHDPGHPVIRFLRRTPKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-25 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 7e-23 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-18 43
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 8e-16 42
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 8e-16 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 7e-16 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-19 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 9e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_6051 YP_004815823.1 ABC transporter BAC0164 Protein 5e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_6051 YP_004815823.1 ABC transporter VFG0925 Protein 1e-20 45
Strvi_6051 YP_004815823.1 ABC transporter VFG1042 Protein 4e-23 43