|
Name : Strvi_5504 (Strvi_5504) Accession : YP_004815305.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : - Position : 6275182 - 6276495 bp Length : 1314 bp Strand : - Note : KEGG: nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal DNA sequence : GTGCAGATACGACGCGTGGCCGTGGTGGGCACCGGATACGTCGGACTGACCACCGGCGCCTGTCTGGCCACCCTCGGCCA TCGAGTGGTGTGCGCGGACACCGACCGCCACAAGGTGGAGCGGCTCCGGCGGGGCGAGGTCGACATCCTCGAGCCTCGCC TGCCCGAACTCGTCCGCGAGGGACTGGACTTGGGGCGGCTGGAGTTCGTCCGGGACACCCGGGCCGCGGTCGCCGACGCC GACGTGGTGTTCCTGTGCCTGCCGACCCCGATGGGCGTCGGCGGCGCCGCCGACCTGGCCGCCGTCGAGGCCGTGGCGGA CCAGATCCGCGACGAGCTGCCGCACGGCAGCGTGGTGGTCAACAAGTCCACCGTGCCCGTCGGCACCGCCGAGCGCGTCG CCGCACTGCTGGACCGTCCGGACGTGGCCGTGGTCAGCAACCCGGAGTTCCTCCGGGAGGGTTACGCGGTGCGCGACTTC CTCCACCCCGACCGCATCGTGGTCGGCGCCGCGGACCAGGACGCTGCGCGACGGGTGGCCGGCCTGTACGCCGGGCTGGA TGCCCCGCTGGTGCTCACCGACGCCGCGGGCGCCGAACTCGCCAAGTACGCCGCCAACTTCTTCCTGGCCATGAAGCTCT CCTTCGCCAACAACCTCGCCACGCTGTGCGAACACTTCGGCGCCGACGTGGACGATGTGCTCGCGGGCATCGGCCACGAC CCCCGCATCGGCTCGGCGTTCCTCCGGCCGGGCCCCGGCTGGGGCGGCTCCTGCCTGCCCAAGGACACCCACGCCCTGCT GACGATCTGTCAGGAGTCGGGCGTGGACTTCCCGCTGCTGGGCGCCACCATCGAGACCAACGTCGAACACCAGCGGCGAC TCGTCGAGCGCGTGGTCGCCGGGTGCACACCGGGCGACGGCTCGCTGCACGGCGTACGGCTGGCCGTGCTGGGCCTGGCC TTCAAGGCGGGCACCTCCGACCTGCGCGACTCACCCGCCCTGGCCATCGCCCGGCTGCTCAAGGAGCGGGGCGCCGAGCT CCACGCCTACGACCCCGCCCTCAGCGAGACCCGCCCCGACCTCAGCGATCTGCTCACCCTCGCCGACACCCCCGAGGAGG CCCTGACGGGAGCGCGCGCCTGTCTCGTCCTCACCGAGTGGCCGGAGTTCCGCGACCTCGACTGGGAGCACATCGCCGGA CTGCTCGGATCCCCGCACGTCTACGACTTCCGCAATCTGCTCGACCCGGACCGGCTCCGCCGCGCCGGGCTGACCTGCGA GGGCATCGGCCGCACGCTTGCGATGGCGCGCTGA Protein sequence : MQIRRVAVVGTGYVGLTTGACLATLGHRVVCADTDRHKVERLRRGEVDILEPRLPELVREGLDLGRLEFVRDTRAAVADA DVVFLCLPTPMGVGGAADLAAVEAVADQIRDELPHGSVVVNKSTVPVGTAERVAALLDRPDVAVVSNPEFLREGYAVRDF LHPDRIVVGAADQDAARRVAGLYAGLDAPLVLTDAAGAELAKYAANFFLAMKLSFANNLATLCEHFGADVDDVLAGIGHD PRIGSAFLRPGPGWGGSCLPKDTHALLTICQESGVDFPLLGATIETNVEHQRRLVERVVAGCTPGDGSLHGVRLAVLGLA FKAGTSDLRDSPALAIARLLKERGAELHAYDPALSETRPDLSDLLTLADTPEEALTGARACLVLTEWPEFRDLDWEHIAG LLGSPHVYDFRNLLDPDRLRRAGLTCEGIGRTLAMAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 9e-40 | 42 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 9e-40 | 42 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 9e-40 | 42 |
