Gene Information

Name : Strvi_5504 (Strvi_5504)
Accession : YP_004815305.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 6275182 - 6276495 bp
Length : 1314 bp
Strand : -
Note : KEGG: nucleotide sugar dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal

DNA sequence :
GTGCAGATACGACGCGTGGCCGTGGTGGGCACCGGATACGTCGGACTGACCACCGGCGCCTGTCTGGCCACCCTCGGCCA
TCGAGTGGTGTGCGCGGACACCGACCGCCACAAGGTGGAGCGGCTCCGGCGGGGCGAGGTCGACATCCTCGAGCCTCGCC
TGCCCGAACTCGTCCGCGAGGGACTGGACTTGGGGCGGCTGGAGTTCGTCCGGGACACCCGGGCCGCGGTCGCCGACGCC
GACGTGGTGTTCCTGTGCCTGCCGACCCCGATGGGCGTCGGCGGCGCCGCCGACCTGGCCGCCGTCGAGGCCGTGGCGGA
CCAGATCCGCGACGAGCTGCCGCACGGCAGCGTGGTGGTCAACAAGTCCACCGTGCCCGTCGGCACCGCCGAGCGCGTCG
CCGCACTGCTGGACCGTCCGGACGTGGCCGTGGTCAGCAACCCGGAGTTCCTCCGGGAGGGTTACGCGGTGCGCGACTTC
CTCCACCCCGACCGCATCGTGGTCGGCGCCGCGGACCAGGACGCTGCGCGACGGGTGGCCGGCCTGTACGCCGGGCTGGA
TGCCCCGCTGGTGCTCACCGACGCCGCGGGCGCCGAACTCGCCAAGTACGCCGCCAACTTCTTCCTGGCCATGAAGCTCT
CCTTCGCCAACAACCTCGCCACGCTGTGCGAACACTTCGGCGCCGACGTGGACGATGTGCTCGCGGGCATCGGCCACGAC
CCCCGCATCGGCTCGGCGTTCCTCCGGCCGGGCCCCGGCTGGGGCGGCTCCTGCCTGCCCAAGGACACCCACGCCCTGCT
GACGATCTGTCAGGAGTCGGGCGTGGACTTCCCGCTGCTGGGCGCCACCATCGAGACCAACGTCGAACACCAGCGGCGAC
TCGTCGAGCGCGTGGTCGCCGGGTGCACACCGGGCGACGGCTCGCTGCACGGCGTACGGCTGGCCGTGCTGGGCCTGGCC
TTCAAGGCGGGCACCTCCGACCTGCGCGACTCACCCGCCCTGGCCATCGCCCGGCTGCTCAAGGAGCGGGGCGCCGAGCT
CCACGCCTACGACCCCGCCCTCAGCGAGACCCGCCCCGACCTCAGCGATCTGCTCACCCTCGCCGACACCCCCGAGGAGG
CCCTGACGGGAGCGCGCGCCTGTCTCGTCCTCACCGAGTGGCCGGAGTTCCGCGACCTCGACTGGGAGCACATCGCCGGA
CTGCTCGGATCCCCGCACGTCTACGACTTCCGCAATCTGCTCGACCCGGACCGGCTCCGCCGCGCCGGGCTGACCTGCGA
GGGCATCGGCCGCACGCTTGCGATGGCGCGCTGA

Protein sequence :
MQIRRVAVVGTGYVGLTTGACLATLGHRVVCADTDRHKVERLRRGEVDILEPRLPELVREGLDLGRLEFVRDTRAAVADA
DVVFLCLPTPMGVGGAADLAAVEAVADQIRDELPHGSVVVNKSTVPVGTAERVAALLDRPDVAVVSNPEFLREGYAVRDF
LHPDRIVVGAADQDAARRVAGLYAGLDAPLVLTDAAGAELAKYAANFFLAMKLSFANNLATLCEHFGADVDDVLAGIGHD
PRIGSAFLRPGPGWGGSCLPKDTHALLTICQESGVDFPLLGATIETNVEHQRRLVERVVAGCTPGDGSLHGVRLAVLGLA
FKAGTSDLRDSPALAIARLLKERGAELHAYDPALSETRPDLSDLLTLADTPEEALTGARACLVLTEWPEFRDLDWEHIAG
LLGSPHVYDFRNLLDPDRLRRAGLTCEGIGRTLAMAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
udgA YP_003784334.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 9e-40 42
udgA YP_005686369.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 9e-40 42
udgA YP_005682185.1 UDP-glucose 6-dehydrogenase Not tested PiCp 7 Protein 9e-40 42