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Name : Strvi_5372 (Strvi_5372) Accession : YP_004815179.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 6015990 - 6016622 bp Length : 633 bp Strand : - Note : KEGG: sgr:SGR_6228 RNA polymerase ECF-subfamily sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 DNA sequence : ATGCCTTCCGCCACGCTGCCCGCCGCACCGATGAGAGCCGTGCACGGCTTCACCACCGCGGCGAACGACCGTCAGGTCAC CGCATGGGCGCTGGCCGCCCGTGACGGCGACCGCGACGCGGTCGACCACTTCATCCGCGCCACCTACCGCGATGTGCGCC GCTTCGTACTCCATCTCAGCGCCGACCCCCACGGCTGTGAGGACCTCGCGCAGGAGACGTATCTGCGGGCGCTGACCGGG CTCTCGCGCTTCGCCGGCCGCTCATCGGCCCGGACGTGGCTGCTGTCGATCGCCCGCCGGGTGGTCGTCGACCGCTACCG CATGGCCGCCGCCCGCCCCCGCACCCTGGAGGCGGACGACTGGCAGGAGGTGGCCGAACGGGCGCAGCCCGTCGGGCTTC CCGGGTTCGACGAGGGGGTGGCGCTGATGGACCTGCTGGCGGCGCTCGCCCCGGCGCGCCGCGAGATGTTCCTCCTCACC ACGGTGCTCGGCCTGCCGTACGCGGACGTCGCCACCGCGACCGGTTGCCCCATCGGCACCGTGCGCTCCCGTGTGGCCCG CGCCCGTGAGGAGATCACCGCACTGCTGGCCGCGGCCGAGAAGGCCGCGGAACCCGTGCGGTTGGCGGGCTGA Protein sequence : MPSATLPAAPMRAVHGFTTAANDRQVTAWALAARDGDRDAVDHFIRATYRDVRRFVLHLSADPHGCEDLAQETYLRALTG LSRFAGRSSARTWLLSIARRVVVDRYRMAAARPRTLEADDWQEVAERAQPVGLPGFDEGVALMDLLAALAPARREMFLLT TVLGLPYADVATATGCPIGTVRSRVARAREEITALLAAAEKAAEPVRLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 6e-21 | 48 |
