Gene Information

Name : Strvi_4830 (Strvi_4830)
Accession : YP_004814668.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 5374396 - 5375133 bp
Length : 738 bp
Strand : +
Note : PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rlg:Rleg_2480 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGTCAGGTGTCGAAGGCAAGGTCGTGGCGATCACAGGTGCCAGCAGCGGCATCGGAGCGGCGACGGCGATCTACCTCGC
CGAGAAGGGCGCCCGGCTCGTGCTCGGGGCCCGACGGGAAGACCGGTTGCACGCGGTAGTGGACCAGATCACGGCGCGGG
GCGGCTCGGCCGTCGGGACGGTCATCGACGTGACGCGCCGCGAGGACCTCGAGCGCCTGACGGACACGGCGGTCGCCCGG
TTCGGCCGGCTCGACGTCCTGGTGTCCAACGCCGGCACGATGGCGGTGTCACCCTTTGACGAGCTGCGCCAGGACGACTG
GGACGCGATGGTCGCGACGCACATCACCGGCCTGCTGAACGGTATCGGGGCGGCACTTCCCGTCTTCAGGCGGCAGCGCT
CCGGTCAGTTCGTCAACATCGCCTCCACCGCGGCCTACGTCGTGAAATCCCCGCAGGCCGTCTACGCCGCCACCAAGACG
GCAGTGAAGGTGCTGACCGAGGGACTGCGGCAGGAGTCGGGACCCCACCTGCGGGTCACCCTGGTCTCGCCCGGGTTCAC
CAACACCGAGGGCGTGGGCAAGGGGGCGAGTCCCGAGGCAGCGGCGGCGGCAGCCCGACAGCGCGACGAGATTGCCATCC
CACCCTCCGCCATCGCGTCGGCGATCTGTTACGCCATCCAGCAGCCCGCCGGCGTCGACATCAGCGAAATCGTCGTCCGG
CCCACCGTGCAAGCCTGA

Protein sequence :
MSGVEGKVVAITGASSGIGAATAIYLAEKGARLVLGARREDRLHAVVDQITARGGSAVGTVIDVTRREDLERLTDTAVAR
FGRLDVLVSNAGTMAVSPFDELRQDDWDAMVATHITGLLNGIGAALPVFRRQRSGQFVNIASTAAYVVKSPQAVYAATKT
AVKVLTEGLRQESGPHLRVTLVSPGFTNTEGVGKGASPEAAAAAARQRDEIAIPPSAIASAICYAIQQPAGVDISEIVVR
PTVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 1e-31 43
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 1e-27 42