|
Name : Strvi_4707 (Strvi_4707) Accession : YP_004814565.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Unknown Product : transposase mutator type Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 5228068 - 5229195 bp Length : 1128 bp Strand : + Note : PFAM: Transposase, mutator type; KEGG: sen:SACE_2334 transposase for IS3508i DNA sequence : ATGAACGACAACGAGATCCTGGCCGTCGGACCGGTCGAGGACGAGCTCGTGGATGAGGTCGTCGAGCGGTTGATGGACCG CGCCGACGCCTCGGGTGCTGCCCTGCTGGGTGAAGGCGGGCTGCTGACCGAGGTGACCCGGGCCGTGCTGGAGCGGGCCC TGGACGCGGAGATGACCGACCACCTCGGATACGAGAAACACGATCCCGCGGGCCACGGCTCGGGCAACAGCCGCAACGGC ACATCGCGCAAGACGGTGCTGACCGATGCGGGGGCGGTCACACTGGCCGTTCCGAGGGACCGTGACGGGTCGTTCGAACC GCAGTTGGTGCCCAAGCACGCCAGGCGGCTCGCGGGCTTCAACGAGCAGGTCCTGTCGCTGTACGCACGCGGCATGTCGG TGCGCGACATCCGCTCGCACCTGGCCGGCATGTACGGCGTCGAGGTCTCACCGGACTTGATCAGCAAGGTCACCGACGCT GTCACCGATGAGCTCGACGCATGGCGGAACAGACCGCTGGACGCGGTCTGGCCGATCATCTACATCGACGCGCTGTGGGT GAAGATCCGCTCCGGATCCGTGGCCTCCCGGCCGGTCTACCTGGCCGTCGGGGTGGACATGGACGGCTGCAAGGACGTGC TCGGCCTGTGGGCCGGCGACGAGGGCGAAGGCGCCACGACCTGGATGACCGTGCTGTCCGAGCTCCGTAACCGCGGGGTC GAGGACGTGTGCATCGTCGCCTGCGACGGGCTGAAGGGCCTGCCCGACGCGGTCACTGCGACCTGGCCCAAAGCCACCGT TCAGACATGCGTGATCCACTTGATCCGTGCCTCGCTGAGATTCGCCTCCAAACAGCACCACGCAAAGCTGGTCACGGAGT TGAAGGCCATTTACACCGCCCCGACCGAGCAGGCCGCCGAGCAGGCCCTCGCCGACTTCACCGCAGGCGAGCTGGGCCAG CGCTATCCCGCGATCGTGCGAACCTGGCAGGCCGCGTGGAGCGAATTCACCCCCTACCTCGCCTTCCCGCCGGAGATAAG GAAGGTCGTCTACTCGACGAACCTGATCGAGTCGATCAACGCACGGCTGCGGAAAGCCACCCGCAACCGCGGACACTTCC CCTCCTAG Protein sequence : MNDNEILAVGPVEDELVDEVVERLMDRADASGAALLGEGGLLTEVTRAVLERALDAEMTDHLGYEKHDPAGHGSGNSRNG TSRKTVLTDAGAVTLAVPRDRDGSFEPQLVPKHARRLAGFNEQVLSLYARGMSVRDIRSHLAGMYGVEVSPDLISKVTDA VTDELDAWRNRPLDAVWPIIYIDALWVKIRSGSVASRPVYLAVGVDMDGCKDVLGLWAGDEGEGATTWMTVLSELRNRGV EDVCIVACDGLKGLPDAVTATWPKATVQTCVIHLIRASLRFASKQHHAKLVTELKAIYTAPTEQAAEQALADFTAGELGQ RYPAIVRTWQAAWSEFTPYLAFPPEIRKVVYSTNLIESINARLRKATRNRGHFPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 8e-87 | 55 |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 5e-85 | 52 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-82 | 50 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 3e-78 | 45 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 3e-68 | 42 |
| c5176 | NP_757024.1 | transposase | Not tested | PAI II CFT073 | Protein | 2e-50 | 41 |
