Name : Strvi_3950 (Strvi_3950) Accession : YP_004813889.1 Strain : Streptomyces violaceusniger Tu 4113 Genome accession: NC_015957 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4212014 - 4214737 bp Length : 2724 bp Strand : + Note : KEGG: sco:SCO6408 Clp protease ATP binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGGGCAGCGGGAATGGGGGCCCTGATCAAGGCCCCGAGGACTTCGGGCCGGATCCACTCGGCGACTTCCTCGCACGCTT CCTCGGGACCGGGCCAGCCGGGCAGCGGCCCGATTCACGACATGTCGACTTCGGCCGGCTGATGAGTGAGAACGCGCGGC ATCTTGTCTCGGCCGCCGCCTCCTACGCCGCCGAACACGGCAGCACCGACCTCGACACCGAACATCTGCTGCGGGCCGCG CTCTCCTCCGAGCCCACCCGGACCATGGTCTCGCGTGCCGGAGCCGACCCCGACCGGATCGCCGCGGAGATCGACCGCGA GGCGGGGGGCGGCCCGCCGCGCAACTCGGTCGCCGTCACCCCGGCCGTCAAGCGGGCGTTGCTCGACGCCCATGAGATAG CCCGCTCACGAGGCTCCTCGTACATCGGCCCCGAACACGTACTGATCGCGCTCGCCGCCAACCGCGAGTCCACCGCCGGG CAGATCCTCAATGCCGCCCGCTTCGAACCCCGGGCCCCCGGTCCGCCCCAGACCGGCGGCCTCACGCCGAGCGCCCCCAC CACCGATCAGCGGCCCGTCGTGGACCAGCGGAAGACCCCGAACCTCGACCGGTTCGGCCGCGATCTGACCGAACTGGCCC GCGAGGGGCGGATCGACCCGGTGATCGGCCGCGATGAGGAGATCGAGCAGAGCATCGAGGTGCTCGCGCGGCGCGGCAAG AACAACCCCGTGCTCATCGGCGAGGCCGGTGTCGGCAAGACGGCCGTCGTCGAGGGGCTCGCCCAGCGGATCACCGACGC CGATGTGCCGGACATCCTGCTCGGCCGCCGGGTCGTCCAGCTCGACATCGCGAGCGTCGTGGCGGGCACCCGCTTCCGCG GCGACTTCGAGCAGCGGGTCACCGGCATCGTCGATGAGATCCGCGCCAACTCCGACGAGTTGATCATCTTCATCGATGAG CTGCACACGGTTGTCGGCGCCGGCGGCGGTGGCTCCGAGGGCGGCCAGATGGACGCGAGCAATCTCCTCAAGCCGGCACT GGCCCGCGGCGAACTGCATGTGATGGGCGCGACCACGCTCCGGGAGTACCGCCAGTACATCGAGAAGGACGCCGCGCTCG CCCGCCGCTTCCAGCCCATCATGGTCCCCGAGCCCACCCCCGCGGACGCCGTCGCCATCCTGCACGGTCTCCGGGACCGC TACGAGGCCCATCACCAGGTCCGCTACACCGACGAGGCGCTGCTCGCCGCCGTCGAGCTCTCCGACCGCTATCTGACCGA CCGTTTCCTGCCCGACAAGGCCATCGACCTCATGGACCAGGCCGGGGCCCGGGTACGGCTGCGCTCCAGCGGCCGCGGCA CCGATGTGCGCGCCCTGGAGCGGGAGGTCGAGCAGCTCACCCGGGACAAGGACCAGGCCGTCGCGTCCGAGAGCTACGAA CGCGCCACCTCCCTGCGGGACCGCATCGCCGAACTGAACACCCGGATCACGGAGGCATCCGGTACGCAGTACCACGGCGG GCGCGTCGCCGAGGTCACCGTCGAGGACATCGCCGAAATCGTCTCCCGGCAGACCGGAATCCCCGTCGCCAGCCTGACCC AGGAGGAGCGCGATCGCCTGCTCGGCCTGGAGGAACACCTCCATCGGCGGGTCGTCGGGCAGGAGGAGGCCGTGGCCGCC GTGGCCGACGCCGTCCTGCGCGCCCGCGCCGGACTCGCCGACCCCAACCGCCCGAGCGGCAGCTTCCTCTTCCTCGGCCC CACCGGCGTCGGCAAGACGGAACTCGCCCGCGCACTGGCCGAGGCGCTCTTCGGCAGTGAGGACCGCATGGTCCGCCTCG ACATGAGCGAGTACCAGGAGAAGCACACCGTCAGCCGCCTGGTCGGCGCGCCCCCCGGATACGTCGGGCACGAGGAGGCC GGGCAGCTCACCGAGGCGGTGCGCCGCCAGCCCTACTCCCTGCTGCTCCTGGACGAGGTGGAGAAGGGACACCCCGATGT CTTCAACATCCTGCTCCAGGTGCTCGAGGACGGCAGGCTGACGGACGCCCAGGGCCGCACCATCGACTTCAAGAACACCG TCATCGTGATGACCAGCAACCTCGGCTCGGAAGCCATCACCGGACGCGGCGGCCCCCTGGGCTTCGGCGGCGGTGACGAC GAGGCCGACGAGGCGGCGCGCCGGGAGCGGGTGCTGCGCCCGCTGCGGGAGCACTTCCGGCCGGAGTTCCTCAACCGCAT CGACGAGGTCGTCATCTTCCGCCGGCTCGCCGACGACCAGCTCCGGCAGATCGCCGATGTACTGCTGGAGGAGACCCGGC GCCGGCTGCGCGCCCAGGACGTCAGCGTGGAGTTCACCCCGCCCGCCGTCGAGTGGCTGGCCCGGCACGGACACCAGCCG GAGTACGGCGCCCGGCCGCTGCGCCGCACCATCCAGCGCGAGGTCGACAATCCGCTCTCCCGGATGCTGCTCAGCGGCAC GCTGCCGGCCCACAGCCATGTCCGCGTCGATGTGGAGAACGAGAAGCTGGTCTTCCACACACAGGAGGCGGAGCGGACGG GGCCCCCCGGCCCGCCGGGCCAGGCGGAGCAGGCCGGGGGGCAGGCGGAGCAGTCCGGACGAACGGAGCAGCCCGGACGG ACGGAGCAGCCCGGACGTACGGAGCAGCCCGGACGAACGGAGCAGTCGGACGAGCCGGGCGGCCCGGCCCGGCCCGAGTG GTAG Protein sequence : MGSGNGGPDQGPEDFGPDPLGDFLARFLGTGPAGQRPDSRHVDFGRLMSENARHLVSAAASYAAEHGSTDLDTEHLLRAA LSSEPTRTMVSRAGADPDRIAAEIDREAGGGPPRNSVAVTPAVKRALLDAHEIARSRGSSYIGPEHVLIALAANRESTAG QILNAARFEPRAPGPPQTGGLTPSAPTTDQRPVVDQRKTPNLDRFGRDLTELAREGRIDPVIGRDEEIEQSIEVLARRGK NNPVLIGEAGVGKTAVVEGLAQRITDADVPDILLGRRVVQLDIASVVAGTRFRGDFEQRVTGIVDEIRANSDELIIFIDE LHTVVGAGGGGSEGGQMDASNLLKPALARGELHVMGATTLREYRQYIEKDAALARRFQPIMVPEPTPADAVAILHGLRDR YEAHHQVRYTDEALLAAVELSDRYLTDRFLPDKAIDLMDQAGARVRLRSSGRGTDVRALEREVEQLTRDKDQAVASESYE RATSLRDRIAELNTRITEASGTQYHGGRVAEVTVEDIAEIVSRQTGIPVASLTQEERDRLLGLEEHLHRRVVGQEEAVAA VADAVLRARAGLADPNRPSGSFLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQEKHTVSRLVGAPPGYVGHEEA GQLTEAVRRQPYSLLLLDEVEKGHPDVFNILLQVLEDGRLTDAQGRTIDFKNTVIVMTSNLGSEAITGRGGPLGFGGGDD EADEAARRERVLRPLREHFRPEFLNRIDEVVIFRRLADDQLRQIADVLLEETRRRLRAQDVSVEFTPPAVEWLARHGHQP EYGARPLRRTIQREVDNPLSRMLLSGTLPAHSHVRVDVENEKLVFHTQEAERTGPPGPPGQAEQAGGQAEQSGRTEQPGR TEQPGRTEQPGRTEQSDEPGGPARPEW |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-146 | 48 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Strvi_3950 | YP_004813889.1 | ATPase AAA | VFG0079 | Protein | 7e-169 | 50 |