Gene Information

Name : Strvi_3890 (Strvi_3890)
Accession : YP_004813831.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4139856 - 4141343 bp
Length : 1488 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase; KEGG: ach:Achl_0085 aldehyde dehydrogenase (NAD(+))

DNA sequence : 
ATGAACCCTCTGCCGCGCCATGACCACTACATCGCGGGCGAGTGGACCGCCCCCGCCGACGGCGGCTACTTCGCCAGCGT
CAACCCGGCCACCGCCGAACCCTGGTACGAGGTGGCGCGCGGCACCGCCGCCGATGTGGACCGTGCGGTGGGCGCCGCCC
GTACCGCCTTCGAGGATCCGCGCTGGCGCGATCTGAGCCAGACCCGGCGCGGGCGGCTGCTGCGGAACCTCGGCGATCTG
ATCGGTGAGCACGCAGAGCGGCTGGCCCGTACCGAGACCCTCGACAACGGCAAGCTGCTGCGGGAGATGCGGGCCCAACT
CGCCGGGCTGCCCGAGTACTTCTACTACTACGCGGGACTCGCCGACAAGATCCAGGGCGAGGTGATCCCCGGGGCCGGCC
GCGAGCTGCTCAACTACACCCTGCGCGAACCGGTGGGCGTGGTCGGCGCCATCACCCCCTGGAACTCCCCGCTGCTGCTC
ACCGCCACCAAGCTGGCCCCGGCCCTGGCCGCGGGGAACACGGTGGTGGTCAAGCCCTCGGAACACACCTCGGCCTCGCT
GCTGGCGCTCGCACCGCTCTTCGAAGAGGCGGGATTCCCGCCGGGAGTGGTCAATGTGGTCACGGGGTACGGCGCGGAGG
CGGGCGCGCCGCTGACCGAGCACGAGGCCGTGGCCAAGGTGACCTTCACCGGCTCCAGCGGGACCGGCCGCCGGATCGCC
CGTACCTGCGCCGACCGGCTGATCGGCTGCACGCTGGAGCTGGGCGGTAAGTCGCCCAACATCATCTTCCCGGACGCCGA
TCTGGGGTCGGCCGCCATGGGGGTGATCGCGGGCATCTTCGCGGCCGCGGGCCAGACCTGTGTGGCGGGGAGCCGGGTGC
TGGTCCACCGGGAGGCGTACGACGAGGTCCTGGAGCGGGTGACGGCGCGGGCGGCCACGATCCGCGTCGGCGATCCGCTG
GAGGAGACCACCGAGCTCGGCCCGCTCGCCCTCGCCGAGCAACTGGAGAAGGTCGAGTCGTATGTCGAGCTGGGGCAGGC
CGAGGGCGGAAAGGTGGTCTGCGGCGGCAGGCGGCCGGAAACGGGCCTCGACGGGTACTTCTACTCCCCCACCGTCTTCA
CCGGCACCGACAACGGGATGCGGATCTGCCAGGAGGAGATCTTCGGGCCGGTCGCGACCGTCATGCCCTTCGGCTCCGAG
GAGGAGGCCCTGGCGATCGCCAATGACTCCGCGTACGGCCTGGCGGCGGGTGTGTGGACCCGGGATGTGAACCGGGTGCA
CCGGATGGCCGCCCGGCTGGAGGCCGGGACGGTGTGGGCCAACACCTATCGCTCGATGTCGCCGATGTCGCCGCGGGCCG
GGTTCAAGACCAGCGGGATGGGGACCGAGCACGGCACGGAGGTGATCCGGGAGTACACCCGGCTGAAGAGCGTCTGGATC
AACATCAGTGAGGAGCCCGCCGGGGATCCCTTCATCCTGAAGTCCTGA

Protein sequence : 
MNPLPRHDHYIAGEWTAPADGGYFASVNPATAEPWYEVARGTAADVDRAVGAARTAFEDPRWRDLSQTRRGRLLRNLGDL
IGEHAERLARTETLDNGKLLREMRAQLAGLPEYFYYYAGLADKIQGEVIPGAGRELLNYTLREPVGVVGAITPWNSPLLL
TATKLAPALAAGNTVVVKPSEHTSASLLALAPLFEEAGFPPGVVNVVTGYGAEAGAPLTEHEAVAKVTFTGSSGTGRRIA
RTCADRLIGCTLELGGKSPNIIFPDADLGSAAMGVIAGIFAAAGQTCVAGSRVLVHREAYDEVLERVTARAATIRVGDPL
EETTELGPLALAEQLEKVESYVELGQAEGGKVVCGGRRPETGLDGYFYSPTVFTGTDNGMRICQEEIFGPVATVMPFGSE
EEALAIANDSAYGLAAGVWTRDVNRVHRMAARLEAGTVWANTYRSMSPMSPRAGFKTSGMGTEHGTEVIREYTRLKSVWI
NISEEPAGDPFILKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 9e-56 43
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-59 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-64 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-61 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-68 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_3890 YP_004813831.1 aldehyde dehydrogenase VFG0082 Protein 1e-64 41