Gene Information

Name : Strvi_3527 (Strvi_3527)
Accession : YP_004813476.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3701885 - 3702697 bp
Length : 813 bp
Strand : -
Note : KEGG: scb:SCAB_78151 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
GTGTCCACACCGGCGGCAACGAAGACGGACGGGTTCGCGGAGGGCGGCGCCCATGCGGCGGCCCGCGCCCGGTCCCTGAC
CAAGGCGTACGGCAGCGGCGAAACGGCCGTGCTCGCGCTGGACGCGGTGGACGTGGAGATCGAACGGGGCAGGTTCACCG
CGGTGATGGGCCCGTCCGGATCCGGCAAGTCCACCCTGATGCACTGTCTGGCCGGTCTCGACACGGTCTCGTCGGGCCAG
GCCTGGCTGGGCGACACCGAGATCACCGGCCTGGGCGACAAGGAGCTGACCCAGCTCCGCCGCGACCGGATCGGCTTCAT
GTTCCAGTCGTTCAATCTGCTGCCCACGCTCAACGCGGCCGAGAACATCACCCTGCCCATGGACATCGCGGGCCACAAAC
CCGACCGGGAGTGGGTGGACCGGGTCATCGACAAGCTCGGGCTGCGGGACCGGCTGCGGCACCGGCCCGCCCAGCTCTCC
GGCGGACAGCAGCAGCGGGTGGCGTGCGCCCGGGCGCTCGCCTCCCGCCCCGAGCTGATCTTCGCGGACGAGCCCACCGG
CAACCTGGACTCACGGTCGGGCCTGGAGGTGCTGCGCTTTCTGCGGGAGGCCGTCGACGAGCTGGGCCAGACGGTCGTCA
TGGTCACCCACGACCCGAGCGCCGCCGCCCACTCCGACCTGGTGCTCTTCCTCGCCGACGGCCGGATCGTGGACCGGATG
GAGCGGCCCACGGCCGAGGCGGTGCTGGAGCGGATGCATATCTTCACCAGTGCCACGCCCGGGGCCGAACCGGAACCCGA
CCCGCTGAGCTGA

Protein sequence : 
MSTPAATKTDGFAEGGAHAAARARSLTKAYGSGETAVLALDAVDVEIERGRFTAVMGPSGSGKSTLMHCLAGLDTVSSGQ
AWLGDTEITGLGDKELTQLRRDRIGFMFQSFNLLPTLNAAENITLPMDIAGHKPDREWVDRVIDKLGLRDRLRHRPAQLS
GGQQQRVACARALASRPELIFADEPTGNLDSRSGLEVLRFLREAVDELGQTVVMVTHDPSAAAHSDLVLFLADGRIVDRM
ERPTAEAVLERMHIFTSATPGAEPEPDPLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-41 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-41 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-41 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_3527 YP_004813476.1 ABC transporter NC_008702.1.4606598. Protein 2e-38 48
Strvi_3527 YP_004813476.1 ABC transporter CP001581.1.gene798.p Protein 2e-43 46
Strvi_3527 YP_004813476.1 ABC transporter CP001581.1.gene598.p Protein 9e-46 45
Strvi_3527 YP_004813476.1 ABC transporter NC_012469.1.7686878. Protein 1e-42 45