Gene Information

Name : Strvi_3149 (Strvi_3149)
Accession : YP_004813121.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3299254 - 3300777 bp
Length : 1524 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase; KEGG: sma:SAV_7177 aldehyde dehydrogenase

DNA sequence :
ATGACGCGTTTCGCAAACCCCGGCTCCGAGGGCTCGGTCGTCAGCTATCAGCCGCGCTATGACCACTGGATCGGCGGCGA
GTACGTACCGCCGGCCCGGGGCCGCTATTTCGAGAACCCGACCCCCGTGAACGGGCAGCCGTTCACCGAGATCGCCCGGG
GCACCGCCGAGGACGTCGAGCGGGCCCTGGACGCCGCCCACGCGGCCGCGCCCGCCTGGGGCCGTACGGCACCCGCCGAG
CGCGCCTCGGTGCTGCTGAAGATCGCCGACCGGATGGAGCAGAATCTGGAGGCGCTCGCGGTCGCGGAGAGCTGGGAGAA
CGGCAAGCCGGTACGGGAGACGCTGGCCGCCGACATCCCGCTGGCCATCGACCACTTCCGCTATTTCGCGGGGGCGATCC
GGGCCCAGGAGGGCAGCCTCTCCGAGCTCGACCACGACACGGTCGCGTACCACTTCCACGAGCCGCTGGGCGTGGTCGCC
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCCACCTGGAAGCTGGCCCCGGCGCTGGCCGCGGGCAACGCGGTGGT
GCTGAAGCCCGCCGAGCAGACGCCCGCCTCGATCCACCTGTGGATGAGCCTGGTGGCCGATCTGCTGCCACCGGGCGTGG
TCAACATCGTCAACGGCTTCGGCGTGGAGGCCGGAAAGCCGCTGGCGTCCAACTCCCGGGTGGCCAAGGTCGCCTTCACC
GGGGAGACCACCACCGGCCGGCTGATCATGCAGTACGCCAGCGAGAACCTGATCCCGGTCACCCTGGAACTCGGCGGCAA
GAGCCCGAACGTCTTCTTCGACGATGTCTCGGCCGCCGACGACGACTTCCTGGACAAGGCGCTGGAAGGGTTCACCATGT
TCGCCCTGAACCAGGGCGAGGTGTGCACCTGTCCCTCGCGGGCCCTGGTCCAAGGCGGCCACTACCAGGCGTTCATGGAC
GCGGCCGTGGCCCGTACGGAGAAGGTGGCGCAGGGGCATCCGCTGGACACCGACACCATGATCGGCGCCCAGGCGTCCAA
CGACCAGCTCGAGAAGATCCTGTCGTATCTGGACATCGGCCGGCAGGAGGGCGCCCGCGTCCTCACCGGCGGCAGCCGCG
CCGAACTCGGCGGCGAGCTGGAGGGCGGCTACTACGTCCAGCCCACGATCTTCGAGGGCGGCAACCATATGCGGGTCTTC
CAGGAGGAGATCTTCGGGCCGGTGGTCGCGGTGGCGCGGTTCACCGACTTCGAGGACGCGATCGGCATCGCCAACGACAC
GCTCTACGGGCTGGGCGCGGGAGTGTGGACCCGGGACGGCACGACCGCGTACCGAGCCGGCCGCGCCATCCAGGCGGGCC
GGGTGTGGACCAATTGCTACCACGCCTATCCGGCGCACGCCGCCTTCGGCGGCTACAAGCAGTCCGGGATCGGCCGCGAG
AACCACAAGATGATGCTGGATCACTACCAGCAGACGAAGAATCTGCTGGTGTCGTACTCCCCGAAGAAGCTCGGCTTCTT
CTAG

Protein sequence :
MTRFANPGSEGSVVSYQPRYDHWIGGEYVPPARGRYFENPTPVNGQPFTEIARGTAEDVERALDAAHAAAPAWGRTAPAE
RASVLLKIADRMEQNLEALAVAESWENGKPVRETLAADIPLAIDHFRYFAGAIRAQEGSLSELDHDTVAYHFHEPLGVVA
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHLWMSLVADLLPPGVVNIVNGFGVEAGKPLASNSRVAKVAFT
GETTTGRLIMQYASENLIPVTLELGGKSPNVFFDDVSAADDDFLDKALEGFTMFALNQGEVCTCPSRALVQGGHYQAFMD
AAVARTEKVAQGHPLDTDTMIGAQASNDQLEKILSYLDIGRQEGARVLTGGSRAELGGELEGGYYVQPTIFEGGNHMRVF
QEEIFGPVVAVARFTDFEDAIGIANDTLYGLGAGVWTRDGTTAYRAGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRE
NHKMMLDHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-132 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 58
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 58
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-136 58
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-136 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_3149 YP_004813121.1 aldehyde dehydrogenase VFG0082 Protein 3e-132 59