Gene Information

Name : Strvi_2962 (Strvi_2962)
Accession : YP_004812939.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 3053181 - 3054611 bp
Length : 1431 bp
Strand : +
Note : TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: sma:SAV_6779 argininosuccinate lyase; PFAM: Fumarate lyase

DNA sequence :
GTGAGCAACGGCAACAGCGGCGACGTCCGGCTCTGGGGCGGCCGCTTCGCCGACGGCCCGTCCGAGGCACTGGAGAAGCT
CAGCGCCTCCGTGCACTTCGACTGGCGCCTGGCGCCGTACGACATCGCCGGATCCCGCGCCCACGCCCGGGTGCTGCACA
CGGCGGGGCTGCTCACCGCCGATGAGCTGGAGCGGATGCTGGCGGGCCTGGACCGGCTGGAGGCCGATGTCGCCTCCGGC
GACTTCACCGGCACCATCGCCGACGAGGACGTGCACACCGCGCTGGAGCGCGGGCTGCTGGAGCGGCTCGGCCCGGACCT
CGGCGGCAAGCTGCGGGCCGGACGGTCCCGCAACGACCAGATCGCCACCCTCTTCCGGATGTATCTGCGCGACCACGCCC
GGATCCTCGGTGGGCTGATCGCCGACCTCCAGCAGGCCCTGGTGGGGCTCGCGGAGGCGCACCCGGACGTCGCGATGCCC
GGCCGTACGCATCTCCAGCACGCCCAGCCGGTGCTCTTCGCCCACCATGTCCTCGCCCATGTCCAGGCGCTGTCGCGGAA
CGCGGAGCGGCTGCGGCAGTGGGACGAGCGCACCGCCGTCTCGCCGTACGGCTCGGGCGCGCTGGCCGGATCCTCGCTGG
GGCTCGACCCGCAGGCGGTCGCGGCCGACCTCGGCTTCGAGCGGGGCTCGTCCGCCAACTCGCTCGACGGCACGGCCTCC
CGTGACTTCGTCGCCGAGTTCGCGTTCATCACCGCGATGATCGGCGTCGATCTGTCGCGGATCGCGGAGGAGATCATCCT
CTGGAACACGAAGGAGTTCTCCTTCGTGACCCTCCACGACGCCTTCTCCACCGGCTCCTCGATCATGCCGCAGAAGAAGA
ACCCGGACATCGCGGAGCTCGCGCGCGGCAAGTCCGGCCGGCTGATCGGCAACCTCACCGGGCTGCTGGCCACGCTCAAG
GCCCTGCCGCTCGCGTACAACCGCGACCTCCAGGAGGACAAGGAGCCGGTCTTCGACTCCTGCGATCAGCTCGAGGTGCT
GCTCCCGGCCTTCACCGGGATGATGGCGACGCTGACCGTCCACCGCGAGCGCATGGAGGAGCTGGCCCCGGCCGGGTTCT
CGCTGGCCACCGACATCGCGGAATGGCTGGTGCGGCAGGGCGTGCCGTTCCGGGTGGCGCACGAGGTCGCGGGGGAATGC
GTCAAGGAGTGCGAGCTGACGGGCATCGAGCTCGACCAGCTCACCGACGAGCAGTTCGCCAAGATCTCCCCGCATCTGAC
GCCCGAGGTCCGCGGCGTCCTCAATGTGCCGGGCGCACTGGCCGCGCGCGACGGCCGCGGCGGCACCGCCCCCGTGGCGG
TGCGGGCCCAGCTCGCGGAGGTCAAGGAGGATCTGGCCGCTCAGTACGCATGGGCGGGCGCCAAGCGCTGA

Protein sequence :
MSNGNSGDVRLWGGRFADGPSEALEKLSASVHFDWRLAPYDIAGSRAHARVLHTAGLLTADELERMLAGLDRLEADVASG
DFTGTIADEDVHTALERGLLERLGPDLGGKLRAGRSRNDQIATLFRMYLRDHARILGGLIADLQQALVGLAEAHPDVAMP
GRTHLQHAQPVLFAHHVLAHVQALSRNAERLRQWDERTAVSPYGSGALAGSSLGLDPQAVAADLGFERGSSANSLDGTAS
RDFVAEFAFITAMIGVDLSRIAEEIILWNTKEFSFVTLHDAFSTGSSIMPQKKNPDIAELARGKSGRLIGNLTGLLATLK
ALPLAYNRDLQEDKEPVFDSCDQLEVLLPAFTGMMATLTVHRERMEELAPAGFSLATDIAEWLVRQGVPFRVAHEVAGEC
VKECELTGIELDQLTDEQFAKISPHLTPEVRGVLNVPGALAARDGRGGTAPVAVRAQLAEVKEDLAAQYAWAGAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-81 46
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-81 46