Gene Information

Name : Strvi_2805 (Strvi_2805)
Accession : YP_004812785.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2864966 - 2866435 bp
Length : 1470 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase; KEGG: sgr:SGR_1533 glycine betaine aldehyde dehydrogenase

DNA sequence :
ATGCCGGAGCTGTTCATCGGCGGCCACTGGACGACCGCCCTCGACGGACACAGCCGCGAGATCCGCTGTCCGGCGGACGG
CTCGCTGGTCGCCGTGGTCGACGAGGCGGGGCCAGGCGACGCCGCCGCCGCGGTGGCCGCCGCCCGGGACGCCTTCGACC
GCGGATCGTGGCCGGGCACCCCGCCCGCCGACCGGGGCGGGCTGCTGCTGCGGGTGGCCGATCTGCTGGAGCGCGAGAAG
CCGACGCTCGCCCGCGCCGAGTCCCTGGACACCGGGAAACGGATGGTCGAGAGCGAGTACGACCTCGACGACATCGCGAA
CTGCTTCCGCTACTTCGGCAACCTCGCCTCCTCCGCCGGCGCCGGCCGCGTGGTGGAGGTGGGCAGCGCGGAGATCGACA
GCAGGGTGGTGCACGAACCGGTCGGGGTCTGTGTGCTGATCACGCCATGGAATTACCCACTGCTGCAGACGGCCTGGAAG
GTGGCGCCCGCGCTGGCCGCCGGTAACACCTTCGTCCTCAAGCCCAGCGAGCTGACCCCGCACACCTCGATCCATCTGAT
GCGGCTGCTGACGGAGGCCGGGCTGCCCGGTGGTGCCGCCAATCTGATCCTGGGTTCGGGGGCCACCGCGGGCGCGCCGC
TGGTCACCGACGAACGGGTGGACATGGTGTCCTTCACCGGCGGGGTGGTCACCGGACGCTGGATCATGTCGGCCGTCGCG
CCCACGGTGAAGAAGCTGGCCCTGGAGCTGGGCGGCAAGAACCCCAATATCGTCTTCACCGACTGCGATTTCGACACCGC
GGTCGACTACGCGCTCACCGCGGTGTTCCTGCACTCCGGGCAGGTCTGCTCGGCCGGCGCCCGGCTGCTGGTCCAGGAGC
AGCTCCATGACGCGTTCGTCGACGAGATCGTCCATCGCGCCCGGAACATCCGACTGGGCGGGCCGTTCGACGAGCACGCC
CGCACCGGGCCGCTGATCTCCGCCGAGCACCGCCAGAAGATCGCCGACTATGTGGCGGCGGGGATCGACGAGGGCGCGGT
GCTGCGCTGCGGCGGGACCCCGCCCGACGATCCGGACCTGGAGAAGGGCTACTACTACCTGCCGACCGTCCTGGACGACT
GCACCCCGGACATGTCCGTGGTGCAGGAGGAGTCCTTCGGCCCGGTGCTCACCGTGGAGCGGTTCCGGGACGAGGACGAG
GCGGTGGCACTCGCCAATGACACGGTGTACGGCCTGGCGGGCGGGGTGTGGACGCAGGACGCGGAGAAGGCGCAGCGGGT
GGCGTCCCGGCTGCGGGCCGGGACCGTATGGATCAACGACTTCCATCCGTATGTCCCGCAGGCCGAGTGGGGCGGGATGA
AGCAGTCCGGTATCGGCCGGGAGCTGGGCCCGTCGGGGCTGCACGAGTACCAGGAGCTCAAGCACATCTGGCGCAACACC
GCGCCCCGTCCGCAGCGGTGGTTCGAATGA

Protein sequence :
MPELFIGGHWTTALDGHSREIRCPADGSLVAVVDEAGPGDAAAAVAAARDAFDRGSWPGTPPADRGGLLLRVADLLEREK
PTLARAESLDTGKRMVESEYDLDDIANCFRYFGNLASSAGAGRVVEVGSAEIDSRVVHEPVGVCVLITPWNYPLLQTAWK
VAPALAAGNTFVLKPSELTPHTSIHLMRLLTEAGLPGGAANLILGSGATAGAPLVTDERVDMVSFTGGVVTGRWIMSAVA
PTVKKLALELGGKNPNIVFTDCDFDTAVDYALTAVFLHSGQVCSAGARLLVQEQLHDAFVDEIVHRARNIRLGGPFDEHA
RTGPLISAEHRQKIADYVAAGIDEGAVLRCGGTPPDDPDLEKGYYYLPTVLDDCTPDMSVVQEESFGPVLTVERFRDEDE
AVALANDTVYGLAGGVWTQDAEKAQRVASRLRAGTVWINDFHPYVPQAEWGGMKQSGIGRELGPSGLHEYQELKHIWRNT
APRPQRWFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-72 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-67 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_2805 YP_004812785.1 aldehyde dehydrogenase VFG0082 Protein 5e-73 41