Gene Information

Name : Strvi_2128 (Strvi_2128)
Accession : YP_004812140.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : helicase c2
Function : -
COG functional category : K : Transcription
COG ID : COG1199
EC number : -
Position : 2086267 - 2088267 bp
Length : 2001 bp
Strand : +
Note : SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: sgr:SGR_1718 ATP-dependent helicase

DNA sequence :
ATGACTGAATCGTCCTCGCCTCCACTCGCCGATCTGCTGCACGCCGCCGTAACCACCGTCGGCGGCACCGAGCGCCCTGG
TCAGACCGCCATGGCCCAAGCCGTGGCGGAGGCGATCGACGACAGCTCCCACCTGCTGGTTCAGGCCGGGACCGGCACCG
GCAAGTCCCTCGGCTATCTGGTGCCCGCCCTCGCCCACGGCGAGCGTGTCGTCGTCGCCACGGCGACCCTCGCCCTGCAG
CGGCAGCTCGTCGAGCGAGACCTGCCCCGCACCGTGGAGGCCCTGCACCCGCTGCTGCGCCGCCGCCCCGAGTTCGCCAT
GCTCAAGGGCCGCTCCAACTATCTGTGCCTGCACCGGCTCCACGAGGGCGTCCCGCAGGAGGACGCCGATGAAGCCGGCC
TCTTCGACCCGTTCGAGGCCGCCACGCCCACCAGCAAGCTCGGCAAGGACCTGCTGCGGTTGCGCGACTGGTCGGACGAG
ACGGAGACGGGCGATCGGGACGATCTGAGCCCCGGTGTCTCGGACCGCGCCTGGTCCCAGGTGTCGGTCACCTCCCGGGA
GTGCCTCGGCGCGTCCAAATGCGCCTATGGCGCGGAGTGCTTCGCCGAGGCCGCCCGTGAGCGGGCCAAGCTCGCCGATG
TCGTCGTCACCAATCACGCGCTGCTCGCCATCGACGCCATCGAGGGCGCCCCCGTGCTGCCCAGCCATGAGGTGCTGATC
GTCGACGAGGCCCATGAGCTGGTCTCCCGGGTGACCGGCGTCGCCAGCGGGGAGCTCACCCCCGGTCAGGTCAACCGCGC
TGTGCGGCGCGCCGCGAAGCTGGTCAACGAACAGGCGGCGGACGCCCTCCAGACTGCCTCGGAGGGCTTCGAGCGGCTGA
TGGAGCTCGCGCTGCCCGGCCGCCTCGAGAAGATCCCCGAGGACCTCGGCTATGCGCTGATGGCGCTGCGCGACGCGGCC
CGCACGGTGATCTCGGCGCTCGGCGCCACGCGGGACGCCTCGGTCAAGGACGAGGACGCGATCCGCAAGCAGGCCCTGGG
CTCCGTGGAGAACATCCACCAGGTGGCCGAGCGGATCGTCGAGGGCTCCGAGTACGACGTGGTCTGGTACGAGCGGCACG
ACCGCTTCGGTGCCTCGCTGCGGGTCGCCCCGCTCTCCGTGTCGGGGCTGCTGCGCGAGAAGCTGTTCGAGGACCGGTCC
GTCGTCCTCACCTCCGCCACGCTCAAGCTGGGCGGGGATTTCAACGGGGTGGCGGCCTCACTCGGTCTCGCCCCCGAGAG
CCCGCAGGATCCGGAGGGCGGCGAGGAGACCGCGCCGCGCTGGCAGGGCCTCGACGTCGGCTCGCCCTTCGACTACTCGA
AGCAGGGGATCCTCTACGTCGCCAAGCATCTCGCCCAGCCCGGCCGCGACGGCAGCCGCGACGATATGCTCGATGAGCTC
GCCGAGCTGGTCGAGGCCGCGGGCGGGCGCACGCTCGGGCTGTTCTCGTCCATGCGCGCCGCCCAGGCGGCCGCGGAGGA
GCTGCGCGGGCGTCTCGATGCGCCCATCCTCCTCCAGGGCGAGGAGACGCTGGGCGAGCTGATCCGTGCCTTCGCCGCCG
ACGCCCGGACCTGCCTGTTCGGGACGCTGTCCCTCTGGCAGGGCGTCGATGTGCCGGGGCCCAGCTGTCAGTTGGTGGTG
ATGGACCGGGTGCCCTTCCCCCGCCCCGACGACCCTCTGATGAGTGCCCGCCAGAAGGCGGTGGAGGAGGCCGGGGGCAA
TGGCTTCATGGCCGTCGCCGCGACCCATGCCGCGCTGCTGATGGCCCAGGGCGCGGGCCGGCTCGTGCGGGCTTCGGACG
ACCGGGGCATCGTCGCCGTCCTGGATCCGCGGGTCGAGCGGGCCCGCTACGGCTCGTTCCTCCGCAAGTCCATGCCGGAC
TTCTGGTACACGACCGACCGCAACCAGGTGCGCCGCTCGCTGGCCGCCATCGACGCGGCGGCCAAGGCCCAGGGGTCCTA
G

Protein sequence :
MTESSSPPLADLLHAAVTTVGGTERPGQTAMAQAVAEAIDDSSHLLVQAGTGTGKSLGYLVPALAHGERVVVATATLALQ
RQLVERDLPRTVEALHPLLRRRPEFAMLKGRSNYLCLHRLHEGVPQEDADEAGLFDPFEAATPTSKLGKDLLRLRDWSDE
TETGDRDDLSPGVSDRAWSQVSVTSRECLGASKCAYGAECFAEAARERAKLADVVVTNHALLAIDAIEGAPVLPSHEVLI
VDEAHELVSRVTGVASGELTPGQVNRAVRRAAKLVNEQAADALQTASEGFERLMELALPGRLEKIPEDLGYALMALRDAA
RTVISALGATRDASVKDEDAIRKQALGSVENIHQVAERIVEGSEYDVVWYERHDRFGASLRVAPLSVSGLLREKLFEDRS
VVLTSATLKLGGDFNGVAASLGLAPESPQDPEGGEETAPRWQGLDVGSPFDYSKQGILYVAKHLAQPGRDGSRDDMLDEL
AELVEAAGGRTLGLFSSMRAAQAAAEELRGRLDAPILLQGEETLGELIRAFAADARTCLFGTLSLWQGVDVPGPSCQLVV
MDRVPFPRPDDPLMSARQKAVEEAGGNGFMAVAATHAALLMAQGAGRLVRASDDRGIVAVLDPRVERARYGSFLRKSMPD
FWYTTDRNQVRRSLAAIDAAAKAQGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 1e-140 50