Gene Information

Name : Strvi_1721 (Strvi_1721)
Accession : YP_004811739.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 1603888 - 1605315 bp
Length : 1428 bp
Strand : -
Note : KEGG: sco:SCO5423 pyruvate kinase; TIGRFAM: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta

DNA sequence :
ATGCGCCGTTCCAAAATCGTCTGCACTCTGGGCCCCGCTGTCGACTCCTACGATCAGCTCAAGTCCCTCATCGAGGCCGG
GATGAACGTGGCCCGGTTCAACATGAGCCACGGAACCCACCCGGAGCATGAGGAGCGGTACCACCGCGTCCGCAAGGCAT
CCGAGGAGACCGGGCACGCGGTCGGCGTCCTCGCCGACCTCCAGGGCCCCAAGATCCGTCTGGAGACCTTCAAGGACGGG
CCGGTGGAGCTGGTCCGCGGGGATGAGTTCATCATCACCACCGAGGACGTGGAGGGTGACCGCACCATCTGCGGCACCAC
CTACAAGGGGCTGCCGGCCGATGTCTCCAAGGGCGACCAGGTCCTGATCAACGACGGCAATGTCGAGCTGCGGGTCACCG
CGGTCGAGGGCTCCCGGGTCCGGACCATCGTCATCGAGGGCGGGGTGATCTCCGACCACAAGGGGATCAACCTGCCGGGT
GCGGCGGTCAATGTGCCCGCGCTGTCCGATAAGGACGTCGAGGACCTGAAGTTCGCCCTGCGGATGGGGTGCGACATGGT
CGCCCTGTCCTTCGTCCGGGACGCGTCCGACGTCCGGGACGTCCACCGCGTCATGGACGAGGTGGGCCGCCGGGTGCCGG
TGATCGCCAAGGTGGAGAAGCCGCAGGCGGTCGCCAATATGACCGAGGTCGTCGCGGCCTTCGACGGGGTCATGGTGGCC
CGTGGTGACCTCGCGGTGGAGTATCCGCTGGAGAGGGTCCCGATGGTGCAGAAGCGGCTGATCGAGCTCTGCCGCCGCAA
CGCCAAGCCGGTGATCGTCGCGACCCAGATGATGGAGTCGATGATCACCAACTCCCGGCCGACCCGCGCCGAGGCCTCCG
ACGTCGCCAACGCGATCCTGGACGGCACCGACGCGGTGATGCTCTCCGCCGAGTCCTCGGTCGGCTCGTACCCGATCGAG
ACGGTCAAGACGATGTCCCGGATCGTCCAGGCCGCCGAGCAGGAGCTGCTCTCGCGCGGTCTGCAGCCGCTGGTGCCCGG
CAAGAAGCCGCGCACCCAGGGCGGTTCGGTGGCCCGCGCGGCCGCCGAGATCGCCGACTTCCTCGGCGCCAAGTCGCTGG
TGGCCTTCACCCAGTCCGGCGACACCGCCCGCCGGCTCTCCCGCTACCGCGCCCAGCAGCCGATCCTGGCCTTCACCACC
GATGTGGCCACCCGCAACCAGCTCACCCTGAGCTGGGGCGTGGAGTCCTTCGTGGTGCCCTATGTCGAGCACACCGACGC
GATGGTCGACCTGGTCGACGCCGAGCTGCTGAAGCTGGGCCGCTACGCCGAGGGCGACACCATGATCATCACCGCCGGTT
CGCCTCCCGGCGTCCCCGGCACCACCAACATGGTCCGGGTGCACCACCTGGGCGGCGCGAGCCAGTAG

Protein sequence :
MRRSKIVCTLGPAVDSYDQLKSLIEAGMNVARFNMSHGTHPEHEERYHRVRKASEETGHAVGVLADLQGPKIRLETFKDG
PVELVRGDEFIITTEDVEGDRTICGTTYKGLPADVSKGDQVLINDGNVELRVTAVEGSRVRTIVIEGGVISDHKGINLPG
AAVNVPALSDKDVEDLKFALRMGCDMVALSFVRDASDVRDVHRVMDEVGRRVPVIAKVEKPQAVANMTEVVAAFDGVMVA
RGDLAVEYPLERVPMVQKRLIELCRRNAKPVIVATQMMESMITNSRPTRAEASDVANAILDGTDAVMLSAESSVGSYPIE
TVKTMSRIVQAAEQELLSRGLQPLVPGKKPRTQGGSVARAAAEIADFLGAKSLVAFTQSGDTARRLSRYRAQQPILAFTT
DVATRNQLTLSWGVESFVVPYVEHTDAMVDLVDAELLKLGRYAEGDTMIITAGSPPGVPGTTNMVRVHHLGGASQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-77 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 3e-77 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 3e-77 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-77 43
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_1721 YP_004811739.1 pyruvate kinase VFG0479 Protein 1e-77 43