Gene Information

Name : Strvi_1526 (Strvi_1526)
Accession : YP_004811546.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : catalase related subgroup domain-containing protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 1396972 - 1398438 bp
Length : 1467 bp
Strand : +
Note : PFAM: Catalase related subgroup; Catalase-related immune responsive; KEGG: sma:SAV_3052 catalase

DNA sequence :
GTGACGGTCCAGGACAACATCACTGGTCCGCTGACCACGGAGTCCGGGGCTCCGGTGGCGGACAACCAGAACAGCGAGAC
GGCGGGCGTCGGCGGTCCGGTCCTCATCCAGGACCAGCACCTGATCGAGAAGCTCGCCCACTTCAACCGCGAGCGGATCC
CGGAGCGGATCGTGCACGCGCGGGGCGCCGGTGCGTACGGCACCTTCACCGTGACCGCGGACGTGAGCAAGTACACCCGC
GCGTCGTTCCTCTCCGAGGTCGGCAAGCAGACCGAGACGTTCCTGCGCTTCTCGACGGTCGCCGGCAACCTCGGCTCGGC
GGACGCGGTGCGCGACCCGCGCGGCTTCGCGCTGAAGTTCTACACCGAGGACGGCAATTACGACCTGGTCGGGAACAACA
CCCCGGTGTTCTTCATCAAGGACGCCATCAAGTTCCCCGACTTCATCCACACCCAGAAGCGCGACCCGTACACCGGCTCG
CAGGAGGCGGACAACGTCTGGGACTTCTGGGGGCTCTCGCCCGAGTCCACCCACCAGGTGACCTGGCTGTTCGGCGACCG
CGGCATCCCCGCCTCGTACCGCCACATGAACGGCTACGGGTCGCACACCTACCAGTGGAACAACGCCGCGGGCGAGGTCT
TCTGGGTGAAGTACCACTTCAAGACCGACCAGGGGATCAAGAGCCTCACCACCGCCGAGGCGGCCGAGACCTCTGGTCTG
GACCCGGACAGCCACCAGCGCGATCTGCGCGAGGCCATCGAGCGCGGTGACTTCCCGACCTGGACCGTGCAGGTGCAGAT
CATGCCGGCGGCCGACGCGGCGAACTACCGCTTCAACCCGTTCGACCTGACCAAGGTCTGGCCGCACGAGGACTACCCGC
CGATCGAGATCGGCAAGCTGGAGCTGAACCGCAACCCGCGGAACATCTTCGCCGAGGTCGAGCAGTCGATCTTCTCGCCG
GCCCACTTCGTGCCGGGCATCGGCCCGTCCCCGGACAAGATGCTCCAGGGCCGCCTCTTCGCGTACGGCGACGCCCACCG
CTACCGCGTCGGCATCAACGCCGACCACCTGCCGGTGAACCGTCCGCACGCGGCCGAGGCGCGCACCTACGGCCGGGACG
GCTTCCTGTACGACGGCCGTCACGCGGGCGCCAAGAACTACGAGCCCAACAGCTTCGGCGGCCCGGCGGAGACCGGCCGG
CCACTGTGGCAGCCGTCCCCGGTCTCCGGCCGGACCGGTGACCACGAGGCCCCCTCGCATGCCGAGGACGACGACTTCGT
CCAGGCGGGGAACCTCTACCGGCTGATGTCGGACGACGAGAAGGCGCGCCTGATCGAGAATCTGGCGCAGTTCATCGCCA
AGGTCTCCCGCGATGACATCGCACAGCGGGCGATCGAGAACTTCCGCAAGGCGGACGCCGACTACGGCAAGCGGCTGGAG
GCCGCGGTTCAGGCCCTGCGCGGCTGA

Protein sequence :
MTVQDNITGPLTTESGAPVADNQNSETAGVGGPVLIQDQHLIEKLAHFNRERIPERIVHARGAGAYGTFTVTADVSKYTR
ASFLSEVGKQTETFLRFSTVAGNLGSADAVRDPRGFALKFYTEDGNYDLVGNNTPVFFIKDAIKFPDFIHTQKRDPYTGS
QEADNVWDFWGLSPESTHQVTWLFGDRGIPASYRHMNGYGSHTYQWNNAAGEVFWVKYHFKTDQGIKSLTTAEAAETSGL
DPDSHQRDLREAIERGDFPTWTVQVQIMPAADAANYRFNPFDLTKVWPHEDYPPIEIGKLELNRNPRNIFAEVEQSIFSP
AHFVPGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHAAEARTYGRDGFLYDGRHAGAKNYEPNSFGGPAETGR
PLWQPSPVSGRTGDHEAPSHAEDDDFVQAGNLYRLMSDDEKARLIENLAQFIAKVSRDDIAQRAIENFRKADADYGKRLE
AAVQALRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 1e-115 56
katA YP_005126717.1 catalase Not tested Not named Protein 2e-100 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 3e-98 50
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 3e-98 50
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 3e-98 50
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 3e-98 50