Gene Information

Name : Strvi_1429 (Strvi_1429)
Accession : YP_004811449.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 1284236 - 1285873 bp
Length : 1638 bp
Strand : +
Note : PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: sco:SCO5117 peptide transport system peptide-binding protein

DNA sequence :
ATGCGCGGAGCCCCGTATTCCCTGTATGCCAGGCGCGCGCTGTCCGCGCTCTGCGTGTCCGCCGTCGCCCTGCCCCTGAC
GGCCTGCGGCGGCGGGGACGGCGGCGCCGAAGACGGTGTCGTCCGCTCGTCCTGGGGCGATCCGCCCAATCCGCTGGAGC
CGGCCAATATCAATGACGTCCAGGGCGGCAAGGTCCTCGACATGATCTTCCGGGGGCTCAAGCGCTACGACCCCAGGAGC
GGCGAGGCCAAGAACGCGCTCGCGGACCGGATCGAAAGCTCCGACCAGCGGAACTACACCATCACCCTCAAGCAGGGCCG
CCGGTTCGCCAATGGGGAGAAGGTCACCGCCGCGTCCTTCGTGAACGCCTGGAACTACGGCGCCCGGATCGACCACAAGC
AGCGCAACGCCTACTTCTTCGAGTACATCGAGGGCTACGACAAGGTCCATCCGGACTCCGGCGCCCCCACCGCCAAGACT
CTCTCCGGGCTGCGGGTCAAGGACGAGCGGACCTTCACCGTCCGGCTCACCCAGAAGTTCTCCACCTGGCCCAAGACGCT
GGGCTACAACGCCTATGCGCCGCTGCCCCGGGCGTTCTTCGAGGACCATGCCGCCTGGCTGAGGAAGCCCGTCGGCAACG
GCCCGTACCAGGTGCGGTCGTACACCAAGGGCTCGGTGATGAAGCTGCGCGCGTGGGACGGCTATCGCGGGCCGGACAAG
GCCCGTAACAAGGGCGTCGATCTGCGCGTCTACACCGACAACAACACCGCCTACACCGATCTCCAGGCGGGCAATCTCGA
TCTGGTCGACGATGTCCCGGCGCAGCAGCTCAAGTTCGTCCGCTCCGACCTCGGCGACCGCTACATCAACCAGCCCGCCG
GGATCATCCAGACCCTCACCTTCCCGATGTACGACCGCGCCTGGAGCGGCCCGGCCAAGGCCAAGGTCCGCCGGGGCATC
TCGATGGCGATCAACCGCGCGCAGATCACCGAGCGGATCTTCCACGGCACCCGCACCGCCGCGACCGACTGGACCTCGCC
GGTCCTGCGCCGCCAGGGCGGCTATCGGCCGGGGCTGTGCGGGGACGCCTGCCGCTACGACCCGGCCCGGGCGCGCAAGC
TGATCAAGGCGGGCGGCGGGCTGCCCGGCGGGCGGATGACGATCACGTACAACGCCGACACCGGCTCCCACAAGGACTGG
GTGGACGCGGTCTGCAACAGCGTCAACACCGTGCTGAGAAGCGACCGGGCCTGTGTCGGCAAACCCGTCGGCACCTTCGC
CGACTACCGCAACAAGATGACGGGCAAGGAGATGACCGGGCCGTTCCGGGCCGGCTGGCAGATGGACTATCCGCTGATCC
AGAACTTTCTGCAGCCCCTGTACTACACCGGCGCCTCCTCCAACGACGGCCACTTCAGCGACACCGGCTTCGACCGGATG
GTGAACCAGGCCAACGCCGCCTCCGCGGACGGCCGGGCCATCGCGGACTTCCGGGACGCGGAGAAGGTCCTCGCCCAGCA
GATGCCCGCCATTCCGCTGTGGTACCAGAACGGCAGCGCGGGCTATTCGCAGCGGCTCAGCGAGGTGGCGCTCAACCAGT
TCAGCGTCCCGGTCTACGCACGGATCAGGGTCGGCTGA

Protein sequence :
MRGAPYSLYARRALSALCVSAVALPLTACGGGDGGAEDGVVRSSWGDPPNPLEPANINDVQGGKVLDMIFRGLKRYDPRS
GEAKNALADRIESSDQRNYTITLKQGRRFANGEKVTAASFVNAWNYGARIDHKQRNAYFFEYIEGYDKVHPDSGAPTAKT
LSGLRVKDERTFTVRLTQKFSTWPKTLGYNAYAPLPRAFFEDHAAWLRKPVGNGPYQVRSYTKGSVMKLRAWDGYRGPDK
ARNKGVDLRVYTDNNTAYTDLQAGNLDLVDDVPAQQLKFVRSDLGDRYINQPAGIIQTLTFPMYDRAWSGPAKAKVRRGI
SMAINRAQITERIFHGTRTAATDWTSPVLRRQGGYRPGLCGDACRYDPARARKLIKAGGGLPGGRMTITYNADTGSHKDW
VDAVCNSVNTVLRSDRACVGKPVGTFADYRNKMTGKEMTGPFRAGWQMDYPLIQNFLQPLYYTGASSNDGHFSDTGFDRM
VNQANAASADGRAIADFRDAEKVLAQQMPAIPLWYQNGSAGYSQRLSEVALNQFSVPVYARIRVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 3e-83 42