Gene Information

Name : Strvi_0362 (Strvi_0362)
Accession : YP_004810430.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 129157 - 129465 bp
Length : 309 bp
Strand : +
Note : PFAM: Transposase IS3/IS911; KEGG: scb:SCAB_0831 transposase

DNA sequence :
ATGCCTGCCCCGAGGAAATACCCGCTGGAGTTGCGTGACCGCGCGGTCCGCATGTATCGCGCCGCCGAGCCGAAGCCCGT
CATCCGCCGTATGGCAGAGGAACTCGGGGTGCATCACGAGGCTCTGCGCAACTGGATCCGTCAGGCCGAGGCTGATGCCG
GTGAGCGAGGCGACATTCTCACCACCGCCGAGCGTGAGGAGCTGGCTGCTCTGCGGAAGGAGAATGCCCAGCTCAAGCGG
GCGAACGAGGTCCTGCGGACGGCCTCAGCTTTTTTCGCGGCCCAGCTCGACCCGACCCGGCCCAGGTGA

Protein sequence :
MPAPRKYPLELRDRAVRMYRAAEPKPVIRRMAEELGVHHEALRNWIRQAEADAGERGDILTTAEREELAALRKENAQLKR
ANEVLRTASAFFAAQLDPTRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 0.002 43
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 0.003 43
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-05 42
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 2e-05 42
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-05 42
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-05 42
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-05 42
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-05 41
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 6e-07 41
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-05 41
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 3e-04 41
unnamed AAF09023.1 unknown Not tested SHI-O Protein 2e-05 41
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 2e-05 41
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 2e-05 41
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 2e-05 41
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 6e-07 41
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 2e-05 41
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 6e-07 41
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 6e-07 41
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_0362 YP_004810430.1 transposase IS3/IS911 family protein VFG1717 Protein 6e-06 42
Strvi_0362 YP_004810430.1 transposase IS3/IS911 family protein VFG0643 Protein 6e-06 41
Strvi_0362 YP_004810430.1 transposase IS3/IS911 family protein VFG1603 Protein 1e-04 41