Gene Information

Name : Strvi_1373 (Strvi_1373)
Accession : YP_004811402.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1224756 - 1225442 bp
Length : 687 bp
Strand : -
Note : KEGG: sco:SCO5035 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACCCCGACAGGATCCCTGCTGATGGCCGACGACCTGCACAAGTCGTACGGCCCTACGCCCGCGCTGGACGGCGCGGA
GTTCTCCATCCACCCCGGCGAGGTCGTCGCCGTCATGGGCCCCTCCGGCTCCGGCAAGTCGACCCTGCTGCACTGCCTGG
CCGGGATCGTCCGGCCGGACTCCGGCTCGGTGCACTACGGCGGGCGCGAGCTGTCCGCCATGTCGGACAGCGAGCGCAGC
AGCCTGCGCCGTGGCGAGTTCGGCTTCGTCTTCCAGTTCGGCCAGCTCGTCCCCGAGCTGACCTGTGTGGAGAACGTCGC
GCTGCCGCTGCGGCTCAACGGGGTCAAGCGCAAGGAGGCGGAGGCCCGGTCGCTGTCCTGGATGGAGCGGCTGGAGGTCG
ACGCCGTGGCGGCCAAGCGGCCCGGCGAGGTCTCCGGCGGTCAGGGGCAGCGCGTGGCGGTGGCCCGCTCGCTGGTCACC
GGGCCGCGGGTGCTGTTCGCCGACGAGCCGACCGGCGCGCTGGACTCGCTCAACGGCGAGCGGGTCATGGAGCTGCTGAC
CGAGGCGGCCCGGGAGACCCGTACGGCCGTCGTCCTGGTCACCCATGAGGCGCGGGTCGCCGCGTACTCCGACCGCGAGG
TCGTCGTGCGCGACGGCAAGGCGCGGGACATGGCGGGCGCCCGATGA

Protein sequence : 
MTPTGSLLMADDLHKSYGPTPALDGAEFSIHPGEVVAVMGPSGSGKSTLLHCLAGIVRPDSGSVHYGGRELSAMSDSERS
SLRRGEFGFVFQFGQLVPELTCVENVALPLRLNGVKRKEAEARSLSWMERLEVDAVAAKRPGEVSGGQGQRVAVARSLVT
GPRVLFADEPTGALDSLNGERVMELLTEAARETRTAVVLVTHEARVAAYSDREVVVRDGKARDMAGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Strvi_1373 YP_004811402.1 ABC transporter NC_008702.1.4606598. Protein 3e-30 45
Strvi_1373 YP_004811402.1 ABC transporter CP001581.1.gene598.p Protein 2e-33 42
Strvi_1373 YP_004811402.1 ABC transporter NC_012469.1.7686878. Protein 7e-36 41