Gene Information

Name : Strvi_1305 (Strvi_1305)
Accession : YP_004811335.1
Strain : Streptomyces violaceusniger Tu 4113
Genome accession: NC_015957
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1147079 - 1148020 bp
Length : 942 bp
Strand : +
Note : KEGG: amd:AMED_1393 multidrug ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGAAGAACTCCGCGCACTCCGGGCTCGCGGTATCACGAAGAGCTTCGGTGATGTCGTCGCCCTGGACGGCATCGATCT
CGATGTAACGCAGGGTCGGATCCACGGCCTGGTCGGACCGAACGGCGCCGGAAAAACGACGTTGCTCGGCCTTCTGCTGG
GGCTCGCGGTCGCCGACAGCGGTCGCCTGGAGGTCCTGGGTACACCGGTCGAGCGGGCACTCGACGCTCCCGACGGTGTC
GCCGGCTTCGTGGACGGCCCCGCTCTCTACCCCTCGCTCACCCCACGGCAGAACCTCGCCGCGCTGGCCGCACTCCGCGG
CCACGACGCGCGCACGGCGGGGATCGACGACGTACTCGCCGAGGTCGGTCTCACCGACGTCGCCGACGACCGTACCCGCG
GCTTCTCCCTCGGCATGCGCCAGCGGCTCGGGCTCGCCGCCGCCCTGCTGACCAAGCCCCGGCTGCTCGTGCTCGACGAA
CCGTCCAACGGCCTCGACCCGGCGGGCAAGAAGCACGTGCACGGTGTCCTCAGCCGGCTCGCGGCCGACGGAACCGCCGT
CGTGCTCTCCAGCCACAACATGGACGACCTCGAGGCGCTGTGCTCCGAGGTGACCATCCTCGCCGCCGGACGCGTCGTCT
TCTCCGGCCCGCTGTCCAAGCTGGCCACCGAGAACCGCGAACTCGACTACCGGCTGCTCACCTCCGACCCGCAGGCCGCG
CGCCGGCTGGCGGACGACGCGCCGGGGATCCAGGTCGTCGACGACCCCGGGGTGCGGCAGGACGCCGGACTGCTCGTCGT
ACGCGCCCTGATGCCGGCCCTCGACCAACTCGTGGTGCGGCTGGTGGAGAGGGGCGTCGCGCTGCGCGAGCTCACTCCCA
TGGTGTCCCCGCTCGAAGCCGCGTTTCTCGCCCTCACCGAGCAGCAGGAGGCGGACAGATGA

Protein sequence :
MEELRALRARGITKSFGDVVALDGIDLDVTQGRIHGLVGPNGAGKTTLLGLLLGLAVADSGRLEVLGTPVERALDAPDGV
AGFVDGPALYPSLTPRQNLAALAALRGHDARTAGIDDVLAEVGLTDVADDRTRGFSLGMRQRLGLAAALLTKPRLLVLDE
PSNGLDPAGKKHVHGVLSRLAADGTAVVLSSHNMDDLEALCSEVTILAAGRVVFSGPLSKLATENRELDYRLLTSDPQAA
RRLADDAPGIQVVDDPGVRQDAGLLVVRALMPALDQLVVRLVERGVALRELTPMVSPLEAAFLALTEQQEADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-29 41