Gene Information

Name : Halar_0172 (Halar_0172)
Accession : YP_004809810.1
Strain :
Genome accession: NC_015955
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 159712 - 159912 bp
Length : 201 bp
Strand : -
Note : KEGG: hvo:HVO_2962 transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3

DNA sequence :
ATGCAGAACAATCTCACCAGTCGGCGCGAAGACGAAAACCTCAGCCAAGGCGAACTCGCCGAAGCTGTCGGTGTCACCCG
CCAGACGATCAATGCAATCGAACGCAACCGATACGATCCATCACTGGAACTCGCTTTCAATCTGGCTGATCACTTCAACT
GCAGTATCGAAGATATATTCGAACCAGATCAAGACGATTAA

Protein sequence :
MQNNLTSRREDENLSQGELAEAVGVTRQTINAIERNRYDPSLELAFNLADHFNCSIEDIFEPDQDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-09 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-09 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-09 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halar_0172 YP_004809810.1 XRE family transcriptional regulator VFG2168 Protein 7e-10 48
Halar_0172 YP_004809810.1 XRE family transcriptional regulator VFG2175 Protein 7e-10 48