Gene Information

Name : Halar_1416 (Halar_1416)
Accession : YP_004807528.1
Strain : halophilic archaeon DL31
Genome accession: NC_015954
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 686149 - 687057 bp
Length : 909 bp
Strand : -
Note : KEGG: hmu:Hmuk_1649 pyridoxal biosynthesis lyase PdxS; HAMAP: Pyridoxal biosynthesis lyase pdxS; PFAM: Vitamin B6 biosynthesis protein

DNA sequence :
ATGGACAAAGTCGACGATATCGAGGAACTCCAGCGGGGCACCGAGCTCGTCAAGCGCGGGTTCGCACAGATGCAGAAAGG
CGGGGTCATCATGGACGTGGTGAACCGCCAACAGGCTCGTATCGCAGAGGACGCCGGCGCCGTCGCCGTCATGCATCTCG
AAGCCGTCCCGGCCGACATCCGCAAGCGCGGCGGCGTCGCCCGGATGGCCAACCCCGGCGAAATCGCCGAGGTTACGGAT
GAGGTCTCCATCCCGGTGATGGGGAAGGTCCGTATCGGCCACCACAAGGAAGCAGAGATTATGGAGGCCGCGGGCGCGGA
CATGGTCGACGAGAGTGAAGTGCTCACACCGGCCGAAGAGAACTACCACATCGACAAGCGCGACTTCACCACGCCGTTCG
TCTGTGGCGCGCGCAACCTCGGTGAGGCGCTCCGGCGCATCGACGAAGGCGCGGCGATGATTCGAACCAAGGGCGAGGCC
GGCACGGGCGACGTGAACCAGGCTGTCCACCACCAGCGCAACATCAGGAGCGCCATCCGCAAGCTCTCGGGGATGAACTT
CGAGGAGCGCGAAATGTGGGCTCGTGAGAACGAGGCCCCCCGCGAACTCGTCCACGAGGCCGCGGACCTCGGGCGCCTGC
CCGTCGTGAACTTTGCGGCCGGCGGCATCGCCACCCCCGCCGACGCGGCGCTGATGATGCACCACGGCTGTGACGGTATC
TTCGTCGGCTCGGGGATCTTCGGCGCAGAGGACCCCGAGAAGATGGGCAACGCCATCGTCGAGGCCGTCAACAACTGGGA
CGACGCCGACCGGCTGATGGAGATCGCCTCCGACATCGGCAGCAGCATGAAGGGCGACGCCAACGTCGACCTGCCGGAGG
AGGAGAAGCTGCAGAACCGCGGGAACTGA

Protein sequence :
MDKVDDIEELQRGTELVKRGFAQMQKGGVIMDVVNRQQARIAEDAGAVAVMHLEAVPADIRKRGGVARMANPGEIAEVTD
EVSIPVMGKVRIGHHKEAEIMEAAGADMVDESEVLTPAEENYHIDKRDFTTPFVCGARNLGEALRRIDEGAAMIRTKGEA
GTGDVNQAVHHQRNIRSAIRKLSGMNFEEREMWARENEAPRELVHEAADLGRLPVVNFAAGGIATPADAALMMHHGCDGI
FVGSGIFGAEDPEKMGNAIVEAVNNWDDADRLMEIASDIGSSMKGDANVDLPEEEKLQNRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-68 58
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 7e-68 58
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-68 58