Gene Information

Name : Halar_2744 (Halar_2744)
Accession : YP_004808759.1
Strain : halophilic archaeon DL31
Genome accession: NC_015954
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 1962183 - 1963565 bp
Length : 1383 bp
Strand : +
Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: hbo:Hbor_05200 seryl-tRNA synthetase

DNA sequence :
ATGCTCAGCCGCCAGACGCTTCGCGAGGAGCCCGAACGGATCCGCGAGGCGCTCGAGAAGAAGGGGGTCGACGACGTCGA
CTTCGACGAGGTGCTCGAGGTGTACGACGAGTGGCGCGACCTCAAAGCCGAGGGTGATGAACTCCGCCACGAGCGCAACG
AGGTCAGCCGAAGCATCGGCCAGCTCAAACAGGAGGGTAAGGAGGAGGAGGCCCAGGCAGCCATCGATCGCTCGGGCGAA
CTCAAAACGCGCCTGCAGGCGGTCGAGGAGCGCGCCGACGAACTCGCAGCCGAACTCGAGACGGCGATGATGCGCCTGCC
GATGATTCCCCAGGAGGACGTGCCCGTGGGCGCCGATGAAGACGAGAACGTCGAGCGCCGGCGCGAGGGGTTCGAGGACC
TGCGCGACCTGCCCGACGACGTGACGCCCCACTACGACCTGGGCGAGGAGCTCGACATCCTCGACTTCGAGCGCGGTGCG
AAGGTCAGCGGCGGCGGCTACTACTTCGCCAAGGGCGAGGGTGCGCGCCTGGAGCACGCGCTCATCCAGTTCTTCCTCGA
TGTCCACCGCGAACAGGGCTACCGCGACATCTTCCCGCCGCTCCCGGTCAACAGCAAATCGATGGAGGGGACGGGGCAGT
TCCCCAAATTCACCGAGGACGCCTACCGTATCGAGGGCGAACACCACGAGGAGTACGACGACGACGACCTCTGGCTCCTG
CCGACGGCGGAGGTCCCCGTCACCAACATGCACCGCGGCGACATCCTGCTGGACGACGACCTGCCGCTGAAGTATCAAGC
CTACTCGCCCAACTTCCGGCAGGAGGCGGGCGAACACGGCACTGAGACCCGGGGTATCGTCCGGGTTCACCAGTTCAACA
AGGTGGAACTGGTGAACTTCGTCCGGCCGGACGAGAGCGACGATCGCTTGGAGGGGCTCGTCGACGAAGCCGAGGAGGTG
CTCCGGCGGCTCGACCTCCCCTACCGCATCCTCGAGATGTGTACGGGCGACCTCGGGTTCACACAGGCCAAGAAATACGA
CATCGAGGTCTGGGCACCCGGCGACGAGATGGCGGACGGGCCCGAGGTGGGCGGCCGCTGGCTCGAGGTCTCCTCGGTCT
CGAACTTCGAGGATTTCCAGGCCCGCCGAGCGGGCATCCAGTACCGCCCCGAGCGCCACGAGAGCGCGGAGTACCTCCAC
ACGCTCAACGGCTCGGGCGTCGCCGTACCGCGCGTGCTGGTGGCGATTCTGGAATACTATCAGAACGAGGACGGCACCGT
CGACGTGCCCGAGGCGCTCCAGCCCTACATGGGCGGACAGGAGGTCGTCGAGGGCCACGAACCGGTGGGCGAGAGCGCGC
TTGGGGCTGGAGATAGAGAGTAA

Protein sequence :
MLSRQTLREEPERIREALEKKGVDDVDFDEVLEVYDEWRDLKAEGDELRHERNEVSRSIGQLKQEGKEEEAQAAIDRSGE
LKTRLQAVEERADELAAELETAMMRLPMIPQEDVPVGADEDENVERRREGFEDLRDLPDDVTPHYDLGEELDILDFERGA
KVSGGGYYFAKGEGARLEHALIQFFLDVHREQGYRDIFPPLPVNSKSMEGTGQFPKFTEDAYRIEGEHHEEYDDDDLWLL
PTAEVPVTNMHRGDILLDDDLPLKYQAYSPNFRQEAGEHGTETRGIVRVHQFNKVELVNFVRPDESDDRLEGLVDEAEEV
LRRLDLPYRILEMCTGDLGFTQAKKYDIEVWAPGDEMADGPEVGGRWLEVSSVSNFEDFQARRAGIQYRPERHESAEYLH
TLNGSGVAVPRVLVAILEYYQNEDGTVDVPEALQPYMGGQEVVEGHEPVGESALGAGDRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-74 46