Gene Information

Name : SACTE_6309 (SACTE_6309)
Accession : YP_004806621.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 7162933 - 7163958 bp
Length : 1026 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: svi:Svir_20810 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
GTGACCGTCGCGGGTCGCGCGTCGGGACGGGCGGGGGACAAGCGGGCCGCCGCGGGGCAGATCGGTCTGCTCGTCGGGGG
ACTGGTGCTGCTGGCGGTCGTCACCGTGCTCAGCATGGGCATCGGCGCCCGCCCGGTCCCGCCGTCCGAGGTCGTGCGCG
CGTTGTTCGACTACCAGGGCACCGACGACCACGTGATCGTGCGTGACGTCCGGGGACCCCGCTCGCTGCTGGCCATCGCG
GTGGGCGCCGCCCTCGCGGTGGCGGGCGCCCTCATCCAGACGCTCGCCCGCAACCCGCTGGCCGAGCCCGGCATCCTCGG
GGTCACCGCGGGTGCCGGGTTCGCCGTCACCGTCGGCTCCGCGCTGGGACTGGCCGCCGGGCAGACGGGCCAACTCGGCT
TCGCCGTCATCGGATCCGTACTCGCGGCGCTGCTGGTGGCCGCCGTCGGGCGGCGCTCACCGCTGCGCCTGGTGCTCACC
GGCGTCGCACTGACCGCCGTGCTGAGCGGTGTCGCGCTGGGCCTGCGGCTGATGCTCCCGGACGTCTTCGACACCTACCG
GTTCTGGTCGGTCGGATCGCTGGCGGCCCGTGAACAGGCTTCGCTGGCACTGCCGTTGACCGCGATCGTGGTGTGCCTGT
GCGGCGCGCTGCTGCTGAGCAGGGCGCTCAACGCGCTGACGCTGGGCGAGAGCGTGGCGCACACCCTGGGGGCGGGGGTC
GGACGCGTACGGGCCGTTGCGCTCGTGCTGATCACCGTGCTCTGCGCGGCGGCGACGGCGGTGGCCGGTCCGATCCTGTT
CGTCGGCCTCATCGTGCCGCACCTGGTGCGCAAGCCGGCCGCGGGCTCGGTGCCCTGGCTCGTCCTCTACACGATGGTGC
TGGGTCCCGTCCTCATGCTGGTCGCCGACATCGGGTCACGGGTCCTGCTGCCCACCGGAGAGGTACCCGTGGGCATCGTG
ACCGCCTTCCTCGGCGGCCCCATGCTCATCTGGGCCGTCCGCCGCTACGGGGCGGGGGCGCTGTGA

Protein sequence :
MTVAGRASGRAGDKRAAAGQIGLLVGGLVLLAVVTVLSMGIGARPVPPSEVVRALFDYQGTDDHVIVRDVRGPRSLLAIA
VGAALAVAGALIQTLARNPLAEPGILGVTAGAGFAVTVGSALGLAAGQTGQLGFAVIGSVLAALLVAAVGRRSPLRLVLT
GVALTAVLSGVALGLRLMLPDVFDTYRFWSVGSLAAREQASLALPLTAIVVCLCGALLLSRALNALTLGESVAHTLGAGV
GRVRAVALVLITVLCAAATAVAGPILFVGLIVPHLVRKPAAGSVPWLVLYTMVLGPVLMLVADIGSRVLLPTGEVPVGIV
TAFLGGPMLIWAVRRYGAGAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 5e-12 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 5e-12 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 5e-12 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 5e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_6309 YP_004806621.1 transport system permease VFG0926 Protein 5e-21 47