Gene Information

Name : SACTE_0637 (SACTE_0637)
Accession : YP_004801114.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 725736 - 726833 bp
Length : 1098 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: sco:SCO0497 iron-siderophore permease transmembrane protein

DNA sequence :
GTGTCCGGCCGGTGGATCCAAGGGATAACGTACGTCGACATGAGCACGACTGCAGTGGAGCGTCCCGCGCTCAGGGGGAC
GATGGACATCCGTCGAAGACGGGTGCTGGGGGTGGGCGTCCTGGTGGTGATCCTCGTGGTCGCCGGGGCGTTGTCGTTGG
CCGTCGGTGCGCGCGCGTTGAGTCCCGCCGAGGTGTGGCACGGCCTGTTCGCCGCCCCCGATTCCGACCGGCGGCTCACC
GAGATCAGGCTCATCGTGCAGACCGTGCGGGTGCCCCGCACGGTGCTCGCGGTCGTGGCGGGCGTCGCGCTCGGGGTCGG
CGGTGCGCTGATCCAGGGGTACACGCGCAACCCGATCGCGGACACGGGGCTGCTCGGGGTCAACAGCGGCGCCTCCTTCG
CCGTGGTGTCGGCGATCGCGCTGTTCGGCTTCACCGACCCGTTCCAGTACGTCTGGTTCGCCTTCCTGGGAGCGGCCGTC
GCCGGGGTGGTCGTGTTCGGACTGGCGAGCATCGGCCGGGGAGCGGGCAATCCGCTGACGCTCGCGCTGGCGGGGCAGGG
AGTCACCGTCTTCCTCGCCGCCATGACGACGGCGGTCGCGATGTCGGACCTGAAGTCGCTGAACGCGCTGAGGTTCTGGA
ACGCCGGCTCGGTGGCCGGCGTCGGATTCGACGTCATCTGGCCGGTGACCGGGTTCGTCGCGGCCGGGCTGGTGTCGGCC
CTGTCCACGCTGCCCTCCCTCAACCTCCTCAACCTGGGCGTCGACGTGGCGCGCGGGCTGGGGGTGAACGTCGCGCTGAG
CCGGACCGTGGGCATCGTCTCGATCACCCTGCTGGCGGGAGCGGCGACGGCGGCCTGCGGCCCCGTCGCGTTCCTCGGCC
TGATGGTGGCCCATGTCGCCCGTTACCTCACCGGTCCGGACTACCGCTGGCTGGTGCCGTACGCGGGTCTGCTCGGGGCC
GTCGTCCTGCTCGTCTGTGACATCGTGGGCCGACTGGTCGTACGCCCGGGCGAGTTGGACGCGGGAGTCGTCGTCGCCCT
CCTCGGCGCCCCGTTCTTCGCGGCCCTGGTGTGGCGAGGAAAGTTCAAGAACGCATGA

Protein sequence :
MSGRWIQGITYVDMSTTAVERPALRGTMDIRRRRVLGVGVLVVILVVAGALSLAVGARALSPAEVWHGLFAAPDSDRRLT
EIRLIVQTVRVPRTVLAVVAGVALGVGGALIQGYTRNPIADTGLLGVNSGASFAVVSAIALFGFTDPFQYVWFAFLGAAV
AGVVVFGLASIGRGAGNPLTLALAGQGVTVFLAAMTTAVAMSDLKSLNALRFWNAGSVAGVGFDVIWPVTGFVAAGLVSA
LSTLPSLNLLNLGVDVARGLGVNVALSRTVGIVSITLLAGAATAACGPVAFLGLMVAHVARYLTGPDYRWLVPYAGLLGA
VVLLVCDIVGRLVVRPGELDAGVVVALLGAPFFAALVWRGKFKNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-16 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-16 42
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-16 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_0637 YP_004801114.1 transport system permease VFG0926 Protein 1e-22 45