Gene Information

Name : SACTE_6078 (SACTE_6078)
Accession : YP_004806397.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6912658 - 6913482 bp
Length : 825 bp
Strand : +
Note : KEGG: sgr:SGR_6742 putative iron-siderophore uptake ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACCGACACCCTCCAGGTCCCCGGCGCGGCGCCGTGCGGCATCGAGGTCCGCGCACTGCGCTCCGGATACCCCGGACG
CCCCGTCGTCGAGGACGTCGACCTCACCGTGCCCGCGGGACAGGTGGTCGCGATCGTCGGCCCCAACGGCTGCGGCAAGT
CCACCCTGTTGCGGACGATCGCCCGGCTGCACCGGCCCGACGCCGGTACCGTCCACGTCGGCGGCGAGGACATCTGGGAG
ATGAACCGGCGCAGGGCCGCACACCGGGTCGCCCTGCTGCCGCAGTCACCACGCGCGCCCGAGGCGGTCACGGTGGCCGG
ACTCGTCCGCTACGGCCGCCACCCCCGCCAGGGCCTGCTGCGTCAGTGGTCGCGGGAGGACGAGCGGGCCGTACGCGGGG
CGCTGGAGGCCACCGGGACGACGGGGCTCGCCGGCGAACGCCTCGACCGGCTCTCCGGCGGCCAGCGCCAGCGCTGCTGG
CTCGCGATGGTCCTGGCCCAGCACACCCCGGTCGTCCTGCTCGACGAACCCACCAGCGCACTCGACCTCGGGCACGCCGT
GGACGTCATGGAGCTGGTCCGCGAGATCGCCGGGACGGGGCGGACCGTCGTCATGGTCCAGCACGACCTGGCGGCGGCCG
CCCGCTACGCCGACATCCTCGTCGCCATGAAGGACGGCCGTGTCGTCGCCCGCGGTGTCCCGGCCGAGACCGTGGACGAA
GCCTTGGTGAAGGAGGTCTACGCGCTGGACGCCGACATCCTGAGCGCCCCCGGCGACGGCTCGCCGGTCGTGGTGCCCCG
CGGCGGCCGGCCCGCGACGACATGA

Protein sequence : 
MTDTLQVPGAAPCGIEVRALRSGYPGRPVVEDVDLTVPAGQVVAIVGPNGCGKSTLLRTIARLHRPDAGTVHVGGEDIWE
MNRRRAAHRVALLPQSPRAPEAVTVAGLVRYGRHPRQGLLRQWSREDERAVRGALEATGTTGLAGERLDRLSGGQRQRCW
LAMVLAQHTPVVLLDEPTSALDLGHAVDVMELVREIAGTGRTVVMVQHDLAAAARYADILVAMKDGRVVARGVPAETVDE
ALVKEVYALDADILSAPGDGSPVVVPRGGRPATT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-50 49
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-50 49
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-50 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-52 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-53 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_6078 YP_004806397.1 ABC transporter-like protein BAC0164 Protein 4e-52 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_6078 YP_004806397.1 ABC transporter-like protein VFG1042 Protein 4e-52 48
SACTE_6078 YP_004806397.1 ABC transporter-like protein VFG0925 Protein 1e-52 47