Gene Information

Name : SACTE_5030 (SACTE_5030)
Accession : YP_004805395.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 5597938 - 5600076 bp
Length : 2139 bp
Strand : +
Note : KEGG: sgr:SGR_2678 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrol

DNA sequence :
ATGACCGCTCTGCCGAAGTCCGCGAAGCAGGAGGCCCCGATGTCCGCCGTCACCCACGCTCCCCGTCCGCACCGGCCCGA
GCCCTCCGGCCGGGGTCCCGGTGGCGGCCGTCCCGCCGGCGGCCTGTTCGACCCCGCACAGCTGGTCAGGTCCCTTCCCG
AGGCGATACGCAAACTCGACCCCCGGATCATGGTCAAGTCCCCGGTGATGTTCGTGGTGCTCGTCGGCTCTGTACTCACC
ACCGTCCTGGCGGCCCTGGACCCGACGGACCTGTTCGGCTGGGCGGTCACCGCCTGGCTGTGGCTGACTGCGGTCTTCGC
CAATCTCGCCGAGGCCGTGGCCGAGGGACGCGGCAAGGCCCAGGCCGACACCCTCCGCAAGGCGCGGACGGGCACCGTCG
CGCGCCGCGTCATCGGTTTGGACGAGGAACGCGTGCCCGGCACCGAGCTGCGCGTCGGCGACCTGGTGGTCTGCGAGGCC
GGTGACCTCGTGCCCGGAGACGGCGACGTCGTCGAGGGCGTGGCGAGCGTCGACGAGTCGGCGATCACCGGGGAGTCCGC
CCCGGTGATCCGGGAGTCGGGCGGCGACCGCAGTGCCGTCACGGGCGGCACGCGGGTGCTCTCCGACCGGATCGTCGTCA
AGATCACCACCAGGCCGGGAGACACGTTCATCGACCGGATGATCAGCCTCGTGGAGGGGGCCGCCCGGCAGAAGACGCCC
AACGAGATCGCGCTCGACATCCTGCTGGCGTCCCTCACCGTCGTCTTCCTGCTCGCGGTCGTCACCCTCCAGCCGTTCGC
CGTCTACGCGGGCCAGGAACAGTCGATGACCGTGCTGACCGCCCTGCTCGTCTGCCTCATCCCGACGACCATCGGCGCCC
TGCTCTCCGCGATCGGGATCGCGGGCATGGACCGGCTCGTGCAGCGCAACGTGCTCGCCATGTCGGGCCGCGCCGTCGAG
GCGGCGGGCGACGTCTCCACACTGCTGCTCGACAAGACGGGCACCATCACCCTGGGCAGCCGGCAGGCGGCCGGGTTCCT
GCCGGTCGAGGGCGTCACGGACGCCGAGCTCGTCGAGGCCGCCCAGCTCTCGTCCCTGGCCGACGAGACGCCCGAGGGCC
GCTCGATCGTGACGCTGGCCGAGGAGAGCCGCGGCCCGCGCGCACGCGACGAAGGAGAGCTGTCCGGCGCCGCGTGGGTG
GCGTTCACCGCGCAGACCCGGATGTCCGGCGTCGACCTCGCCGGCCGCCGGATACGCAAGGGGGCGGCCGGATCCGTCCT
GGCCTGGGTCACCGGCCGGGGCGGCCCGGTGCCCGCCGACGCCGAGGTACTGACCGGCCAGGTCGCGAAGGCGGGCGGCA
CCCCCCTGCTGGTGGCCGTCGAGGACGGCCGGGGCGCCCGGGTGCTCGGGGTGGTCCACCTCAAGGACGTCGTCAAACCC
GGGATGCGCGAGCGGTTCGCCCAGCTGCGGCGCATGGGTATCCGCACCGTCATGATCACCGGGGACAACCCGCTGACCGC
GAAGGCGATCGCCGAGGAGGCGGGCCTCGACGACTTCCTCGCCGAGGCCACGCCCGAGGACAAGATGGCCCTCATCAAAC
GGGAGCAGGCCGGGGGCAGGCTCGTCGCGATGACCGGGGACGGCACCAACGACGCCCCAGCCCTCGCCCAGGCGGACGTC
GGCGTCGCCATGAACACCGGCACCTCGGCCGCCAAGGAGGCCGGGAACATGGTGGACCTGGACTCCGATCCGACCAAGCT
CATCGAGATCGTCGCCATCGGCAAGCAGTTGCTGATCACCCGGGGTGCCCTGACGACGTTCTCCGTCGCCAACGACGTCG
CGAAGTACTTCGCGATCATCCCCGCGATGTTCGCCGCCGTGTATCCGGGCCTGGACAAGCTCAACATCATGGACCTGTCC
TCGCCCCGGACCGCGATCCTCTCGGCGGTGATCTTCAACGCCCTGATCATCGTCGCGCTCGTACCGCTCGCGCTGAAGGG
CGTGCGCTACCGGCCGGCCGGGGCCGACCGGATGCTCCGGCGCAACCTCACCGTCTACGGGATCGGCGGACTCGTCGCCC
CGTTCATCGGGATCAAGCTCATCGACCTGGCCCTCTCCCTCGTCCCCGGACTGCGCTGA

Protein sequence :
MTALPKSAKQEAPMSAVTHAPRPHRPEPSGRGPGGGRPAGGLFDPAQLVRSLPEAIRKLDPRIMVKSPVMFVVLVGSVLT
TVLAALDPTDLFGWAVTAWLWLTAVFANLAEAVAEGRGKAQADTLRKARTGTVARRVIGLDEERVPGTELRVGDLVVCEA
GDLVPGDGDVVEGVASVDESAITGESAPVIRESGGDRSAVTGGTRVLSDRIVVKITTRPGDTFIDRMISLVEGAARQKTP
NEIALDILLASLTVVFLLAVVTLQPFAVYAGQEQSMTVLTALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVE
AAGDVSTLLLDKTGTITLGSRQAAGFLPVEGVTDAELVEAAQLSSLADETPEGRSIVTLAEESRGPRARDEGELSGAAWV
AFTAQTRMSGVDLAGRRIRKGAAGSVLAWVTGRGGPVPADAEVLTGQVAKAGGTPLLVAVEDGRGARVLGVVHLKDVVKP
GMRERFAQLRRMGIRTVMITGDNPLTAKAIAEEAGLDDFLAEATPEDKMALIKREQAGGRLVAMTGDGTNDAPALAQADV
GVAMNTGTSAAKEAGNMVDLDSDPTKLIEIVAIGKQLLITRGALTTFSVANDVAKYFAIIPAMFAAVYPGLDKLNIMDLS
SPRTAILSAVIFNALIIVALVPLALKGVRYRPAGADRMLRRNLTVYGIGGLVAPFIGIKLIDLALSLVPGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-168 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-169 60
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 9e-147 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 8e-146 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 1e-145 55