Gene Information

Name : SACTE_4742 (SACTE_4742)
Accession : YP_004805108.1
Strain : Streptomyces sp. SirexAA-E
Genome accession: NC_015953
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 5256325 - 5257446 bp
Length : 1122 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: sgr:SGR_1953 iron ABC transporter

DNA sequence :
GTGAGGGACAGTGCGCAACCGTATGCCGTCCGCCGCGGTGACCGGGCCGTGAGCGGCCCGGTCCTCCAGGGCGCGAAGGA
ACAGCAGGAGGCGGTCCGCACACCGCGGCGACGCCGCACGCACAGCCGCCCCGTCCTCGCCCTGGGACTCCTCCTCGGCC
TGGCCGTACTCCTGCTGACCGTCCTGGCGAGCCTCGCCGTCGGCGCGGGCGACGTCTCCTTCCAGGACGTGCTGCACGGG
GTCTTCGACCCGGACCGTTCGGTCAAGGGCCAGCTCATCGTCCAGGAGGTGCGCATCCCGCGCACCGTGGCCGGACTGCT
GGCCGGTGCCGCGCTCGGCCTGGCGGGCACGGTCATGCAGGGCGTGGCCCGCAACCCGCTCGCCGACCCGCAGCTCCTCG
GCATCAACGCCGGTGCCTCGGTCGCCGTCGTGTGCTCGATCAGCTTCCTCGGCTTCACCGTCGCCACCCAGTACATCTGG
TTCGGCTTCCTCGGCGCCCTGCTCGCCGCGCTCCTGGTGTACGGCGTCGGCTCGCTCGGCAGGGAAGGGGCTACCCCGGT
GAAGCTGGCCCTGGCCGGGGCCGCGACGAGCGCCGTACTCACCTCGGTGACCAGCGCCGTCCTGCTCCAGGACCGCGAGG
GCTACGACCGGTTCCGCTTCTGGCAGCTCGGCGCGCTGACCGCCCGCGACTCCGAGGTGCTGTGGCAGGTGGCGCCGTTC
ATCGCCGTCGGCGTGGTGCTCGCACTGGTGCTGGGGCCGCAGCTCAACACCCTGTCCCTCGGCGACGACCTGGCGCGCGG
CCTCGGCCAGCGCGTCGGGATCGCCCGGCTGGTGTCCGCGCTCGTCGTGGTGCTGCTGTGCGGGGCGGCGACGGTGGTCG
CGGGCCCGATCGGCTTCGTCGGCCTCGCCGTCCCGCACGCCGCCCGGCTCCTCACCGGGCCCGACTACCGCTGGGTGCTG
CCGTACAGCATGGTGCTCGCCCCGATCATGCTCCTCGTCGCCGACATCATCGGCCGGGTCATCGCCCCGCCCGGCGAGGT
GCAGGTGGGCGTGATCACGGCCGCGATCGGCTGCGTCCCCTTCATCTGGCTCGTCCGGCGCAGGAAGCAGGTGGAACTTT
GA

Protein sequence :
MRDSAQPYAVRRGDRAVSGPVLQGAKEQQEAVRTPRRRRTHSRPVLALGLLLGLAVLLLTVLASLAVGAGDVSFQDVLHG
VFDPDRSVKGQLIVQEVRIPRTVAGLLAGAALGLAGTVMQGVARNPLADPQLLGINAGASVAVVCSISFLGFTVATQYIW
FGFLGALLAALLVYGVGSLGREGATPVKLALAGAATSAVLTSVTSAVLLQDREGYDRFRFWQLGALTARDSEVLWQVAPF
IAVGVVLALVLGPQLNTLSLGDDLARGLGQRVGIARLVSALVVVLLCGAATVVAGPIGFVGLAVPHAARLLTGPDYRWVL
PYSMVLAPIMLLVADIIGRVIAPPGEVQVGVITAAIGCVPFIWLVRRRKQVEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-31 43
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-31 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SACTE_4742 YP_004805108.1 transport system permease VFG0926 Protein 3e-29 50